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Cedric Midoux / forkeasy16s
GNU Affero General Public License v3.0Updated -
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mechanistic-statistical environement
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URGI-Anagen / TE_finder
CeCILL Free Software License Agreement v2.0A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
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Cedric Midoux / deepomics16S
GNU General Public License v3.0 or laterUpdated -
in-sylva development / in-sylva.search.app
GNU General Public License v3.0 or latersearch.app is used by package search, and implement search processes
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Omnicrobe / Omnicrobe web
Apache License 2.0Updated -
in-sylva development / in-sylva.source.manager
GNU General Public License v3.0 or laterProject dedicated to source managment. It allows user to upload data in the system
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genotoul-bioinfo / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
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MAILLARD NOEMIEN / EAGLE
MIT LicenseUpdated -
Cedric Midoux / workflow_metagenomics
GNU Affero General Public License v3.0Updated