Explore projects

Remote module for Orfeo ToolBox

diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library

github mirror: https://github.com/MetExplore/dexom-python

pdf2blocs merges the result of pdftotext and pdftohtml commands (from poppler project). The pdf conversion was optimized to translate the Plant Health Alert Bulletin into html files. This project is part of the d2kab project.

GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)

A Python scripting interface for CB-Geo MPM

Example how to use the stac-extension-genmeta package

pyotb is a library that enables easy use of the Orfeo Tool Box (OTB) in Python

Utils for the MIRRI project

Interekt (INTERactive Exploration of Kinematics and Tropisms) is a user-friendly software for tracking and modeling plant motions.

Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.

Python implementation of the Scheet and Stephens model and extensions

kvh viewer