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URGI-Anagen / panTEannot
CeCILL Free Software License Agreement v2.0panTEannot serially annotates transposable elements from multiple genomes using a common reference library. The annotation is a light version of TEannot from REPET package. These annotations can be used as input for the panREPET tool.
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Agroclim / SAVA
GNU General Public License v3.0 or laterSuivi des Applications jaVa d'Agroclim (Documentation en ligne).
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URGI-Anagen / panREPET
CeCILL Free Software License Agreement v2.0panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.
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CHIP-GT / AntiPoachingGame
MIT LicenseImplementation of the Anti-Poaching game, a grid-world game between cooperative rangers and independent poachers.
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Félix Hartmann / Interekt
GNU General Public License v3.0 onlyInterekt (INTERactive Exploration of Kinematics and Tropisms) is a user-friendly software for tracking and modeling plant motions.
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Sandra Pelletier / transcriptomic_analysis_ed-vaame
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
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PGBA_public / GenoFig
GNU General Public License v3.0 or laterGenoFig is a tool for graphical vizualisation of annotated genetic regions, and homologous regions comparison. It was designed to be as easy to use as possible for biologists.
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ISDM-MESO / Ai Tooling
Apache License 2.0Updated -
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FAIR-DATA management application stack for laboratory experiment
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PASTE (Platform for Automated Simulation and Tools in Epidemiology) is a software pipeline that produces a web architecture for a decision-support tool based on mechanistic epidemiological models (written with EMULSION)
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