Explore projects

Caulifinder : a pipeline for automatic detection and annotation of caulimovirid endogenous viral elements in plant genomes

MCQR is a comprehensive set of objects and function for R to handle MassChroQ results.

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

Nextflow pipeline to extract syntenic blocks using the MCScanX program.

The Orfeo ToolBox (OTB) extension for Deep Learning. Enable the use of TensorFlow models on Remote Sensing images. Provides OTB applications for patches sampling, model training, model inference, hybrid models, and so on.

Tropolink backend (API)

Python library providing a variety of useful functions for 4P modules

STAC tools to simplify STAC use: local STAC creation, filter and process STAC ItemCollections (local and remote).

Documentation

Website

FAIR-DATA management application stack for laboratory experiment

Pipeline Nextflow