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DARBOT Vincent / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. It has been developed in collaboration with several CATI BIOS4biol agents.
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seqOccIn / HiFi metabarcoding analysis
GNU General Public License v3.0 or laterUpdated -
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LIPME / Nicknames Pipeline
Apache License 2.0A pipeline to compute correspondance tables between genome annotations
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POUBLAN COUZARDOT ADELA / hackathon_nf-core
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Arthur Pere / virusPipeline
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Nextflow pipeline to extract syntenic blocks using the MCScanX program.
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LIPME / nf-ont-bacteria-assembly
Apache License 2.0A simple pipeline to assemble bacterial genomes from ONT sequencing
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