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massXpert2 (of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to create polymer chemistry definitions. The definitions are then used to perform calculations in a desktop calculator-like manner and to perform sophisticated polymer sequence mass spectrometry simulations.

GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)

Code storage Area of the RECORD Project packages.

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

https://umr-astre.pages.mia.inra.fr/sit-methods/

The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.

set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....

C++ implementation of SpecOMS and new developments