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PAPPSO / Mseater
GNU General Public License v3.0 onlyUpdated -
SIMONCINI DAVID / pils
GNU General Public License v3.0 onlyUpdated -
Pole MIAME / Acoustic / acoustique
GNU Lesser General Public License v2.1 onlyUpdated -
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A library that contains a subset of the ProteoWizard libpwiz library with code mainly aimed at loading MS files (XML-based and MGF).
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Pierre Montalbano / LinToulbar2
MIT LicenseUpdated -
Life game (Conway) using vle::discrete_time cells and vle.generic.builder Builder model to generate cells and their connexions
Topics: vleUpdated -
PAPPSO / beads
CeCILL Free Software License Agreement v2.0"beads" (billes en Français) est un logiciel de détection et de quantification de spots sur des images de gels d'électrophorèse bidimensionnelle.
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GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)
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Nathalie Rousse / spell-qtl
GNU General Public License v3.0 onlySpecies Perscrutandis Enixe Locis Locabuntur.
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Gauthier Quesnel / irritator
MIT LicenseUpdated -
PAPPSO / massXpert
GNU General Public License v3.0 onlymassXpert (of the http://www.msxpertsuite.org software collection) is a program that allows one to define brand new polymer chemistry definitions, to use them to define polymer sequences and to perform a large array of chemical simulations on them.
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Renne Thomas / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including usefull functions to handle proteomics data (spectrum, peptides, ions, isotopes).
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PAPPSO / MassChroQ
GNU General Public License v3.0 onlyMassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.
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PAPPSO / PAPPSOms-tools
GNU General Public License v3.0 onlyset of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....
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PAPPSO / libodsstream
OtherLightweight C++ and Java library to produce Open Document Spreadsheet (.ods) files. The main goal is to write data as simply as writing it to a simple text file (csv or tsv). Libodsstream allows yout to read and write ODS files as stream
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PAPPSO / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
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URGI-Anagen / TE_finder
CeCILL Free Software License Agreement v2.0A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
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PAPPSO / xtpcpp
GNU General Public License v3.0 onlyX!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.
Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102
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