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URGI-Anagen / TE_finder
CeCILL Free Software License Agreement v2.0A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
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PAPPSO / tandemng-mass
Artistic License 1.0 (Perl)Updated -
PAPPSO / MassChroQ
GNU General Public License v3.0 onlyMassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.
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PAPPSO / libodsstream
OtherLightweight C++ and Java library to produce Open Document Spreadsheet (.ods) files. The main goal is to write data as simply as writing it to a simple text file (csv or tsv). Libodsstream allows yout to read and write ODS files as stream
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PAPPSO / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
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Gauthier Quesnel / irritator
MIT LicenseUpdated -
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A library that contains a subset of the ProteoWizard libpwiz library with code mainly aimed at loading MS files (XML-based and MGF).
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LOZAC H LOIC / AgriSoilMoisture
Apache License 2.0Computes soil moisture over agricultural areas
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SIMONCINI DAVID / pils
GNU General Public License v3.0 onlyUpdated -
Pierre Montalbano / LinToulbar2
MIT LicenseUpdated -
The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.
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FACT / fact
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GNet / APPINetwork
BSD 3-Clause "New" or "Revised" LicenseConstruction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes
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GSpace is a simulator for large genomic data, based on a generation-by-generation coalescent that takes into account small population size, recombination, and isolation by distance.
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A library of Cost Function Networks and other graphical model instances (MRF, PWMaxSat,...).
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