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BATARDIERE Bastien / pyPLNmodels
MIT LicenseUpdated -
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OpenSILEX / opensilex-docker-compose
GNU Affero General Public License v3.0This project aims to create a opensilex instance running on docker-compose stack
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PAPPSO / MCQR
GNU General Public License v3.0 onlyMCQR is a comprehensive set of objects and function for R to handle MassChroQ results.
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lacoste louis / mia-stage-2024
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PAPPSO / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
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urgi-is / data-discovery
Creative Commons Attribution 4.0 InternationalDataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.
This tool is expected to be easily customizable for specific filters, environments, or data schemas.
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Agroclim / Fake CAS server
GNU General Public License v3.0 or laterFake CAS server for development purpose.
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GeT-nextflow-NGL-Bi / wf-Illumina-nf
CeCILL Free Software License Agreement v2.1Pipeline Nextflow
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Cedric Midoux / deepomics16S
GNU General Public License v3.0 or laterUpdated -
in-sylva development / in-sylva.source.manager
GNU General Public License v3.0 or laterProject dedicated to source managment. It allows user to upload data in the system
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genotoul-bioinfo / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
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