Explore projects
-
Updated
-
Angular interface of the Cassiopée software
Production version of Cassiopée is available at https://cassiopee.g-eau.fr
Updated -
Updated
-
metexplore / cbm / SAMBA-project / SAMBA
MIT LicenseUpdated -
metexplore / cbm / dexom_python
GNU General Public License v3.0 or laterdiversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library
github mirror: https://github.com/MetExplore/dexom-python
Updated -
Mathieu Laparie / yocto-utils
GNU Affero General Public License v3.0Some terminal utilities for Yoctopuce modules
Updated -
PAPPSO / PAPPSOms-tools
GNU General Public License v3.0 onlyset of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....
Updated -
Updated
-
Prima Regional Model developped during the UE project PRIMA (2008-2011). This code has been produced by Sylvie Huet and Nicolas Dumoulin.
Updated -
Updated
-
URGI-Anagen / panTEannot
CeCILL Free Software License Agreement v2.0panTEannot serially annotates transposable elements from multiple genomes using a common reference library. The annotation is a light version of TEannot from REPET package. These annotations can be used as input for the panREPET tool.
Updated -
JACQUIN Laval / refpop
GNU General Public License v3.0 or laterThis repository contains the refpop R scripts, for achieving reproducible data analysis and results, according to the FAIR principles
Updated -
Agroclim / SAVA
GNU General Public License v3.0 or laterSuivi des Applications jaVa d'Agroclim (Documentation en ligne).
Updated -
-
URGI-Anagen / panREPET
CeCILL Free Software License Agreement v2.0panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.
Updated -
JACQUIN Laval / khamix
GNU General Public License v3.0 or laterKernelized HAplotype-based MIXed model association mapping (KHAMIX)
Updated -
JACQUIN Laval / geno_metabo_nirs_prediction
GNU General Public License v3.0 or laterUpdated -
JACQUIN Laval / beagle_v4-0
GNU General Public License v3.0 or laterThis repository provides a generic shell script, the Beagle 4.0 executable, and additional utilities designed to streamline the imputation process.
Updated