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Ce projet est un exemple de plugin utilisant le noyau de l'application des SOERE

Dotplot large Genomes in an Interactive, Efficient and Simple way

Documentation and presentation materials of the project

Snakemake workflow cookiecutter template

Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet

Containers 4 VLE

Scripts for the analysis described in the paper "Major reorganization of chromosome conformation during muscle development in pig" (Marti-Marimon et al, 2021).

http://dx.doi.org/10.3389/fgene.2021.748239

Creation and provisioning a virtual machine (Ubuntu/VirtualBox) containing The Littlest JupyerHub (TLJH)

Run Ocelet in a docker container.

Some scripts for the methylation analysis of the ChickStress project.