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Repository containing input and output datasets to perform tests on metaGWGS

This repository contains various sources for INRAE in LaTeX:

Beamer template for INRAE presentation. This is an unofficial template, inspired by the official ppt presentation template, provided as is and without any guarantee. Images remain the property of INRAE. CSS appendix file. It is also an unofficial template, without the original comment and inspired by the 2023 CSS appendix file.

https://umr-astre.pages.mia.inra.fr/sit-sudan

Contains code to create and manage the SUDOANG rivers database

A presentation and day book area.

Template for data-analysis projects using R and targets.

A utility R-package with consolidated tools and templates for staffs at PRC/BIOS

Report and data on coupling the seinebasin2 model with the Telemac 2D "arteseine" model from Artelia

Implementation of the deterministic model of the intestinal including microbiota, as described in Darrigade et al., 'A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations.' (2021).

Epidemics at the interface between domestic and wild swines in Corse (ContActs Pigs CorsE). https://umr-astre.pages.mia.inra.fr/capiche/

Benchmark second and third generation sequencing technologies on 3 synthetic microbial communities