Explore projects
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PAPPSO / MCQR
GNU General Public License v3.0 onlyMCQR is a comprehensive set of objects and function for R to handle MassChroQ results.
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migale / affiliationExplorer
MIT LicenseShiny app for exploration and disambiguation of FROGS multi-affiliation
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Collaborative repository of the ASTRE team for the ASF challenge. https://www6.inrae.fr/asfchallenge/
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A method to compare a clustering to a classification with ordinal classes.
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umrf / ExploreMetabar
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Epidemics at the interface between domestic and wild swines in Corse (ContActs Pigs CorsE). https://umr-astre.pages.mia.inra.fr/capiche/
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Code to reproduce the results of "Gene regulatory network inference methodology for genomic and transcriptomic data acquired in genetically related heterozygote individuals", https://doi.org/10.1093/bioinformatics/btac445
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Dispersion of Culicoides imicola using friction maps https://umr-astre.pages.mia.inra.fr/culicoides-friction
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umrf / ranomaly
GNU General Public License v3.0 onlyUpdated -
GNet / APPINetwork
BSD 3-Clause "New" or "Revised" LicenseConstruction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes
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Some R codes and a package (in beta) for changepoint detection in trees (with model selection and dynamic programming). It is based on the Ph.D. work of Solène Thépaut (Chapter 3, see: https://tel.archives-ouvertes.fr/tel-02457109/document)
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Life game (Conway) using vle::discrete_time cells and vle.generic.builder Builder model to generate cells and their connexions
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A quick overview of the changes of Covid-19 mortality in the most affected countries of the European Union + the United Kingdom and of Africa. https://umr-astre.pages.mia.inra.fr/covid19-mortality/
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