Explore projects

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

MCQR is a comprehensive set of objects and function for R to handle MassChroQ results.

mineXpert2 (of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to visualize mass spectrometric data in their full MS^n depth. Sophisticated mouse-driven mass data integrations are easily performed.

GenoFig is a tool for graphical vizualisation of annotated genetic regions, and homologous regions comparison. It was designed to be as easy to use as possible for biologists.

Fork from https://github.com/kubernetes-sigs/kubespray.git

Angular interface of the Cassiopée software

Production version of Cassiopée is available at https://cassiopee.g-eau.fr

Lightweight C++ and Java library to produce Open Document Spreadsheet (.ods) files. The main goal is to write data as simply as writing it to a simple text file (csv or tsv). Libodsstream allows yout to read and write ODS files as stream

set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library

github mirror: https://github.com/MetExplore/dexom-python

This project is the entrypoint for an Information System dedicated to manage a forest experimentation metadata catalog. It relies on a metadata standard available at URL https://data.inrae.fr/dataset.xhtml?persistentId=doi:10.15454/ELXRGY.

Script bash grass pour calculer les surfaces foliaires (disponibles dans des scans) vers des tables postgres

Soil - EJP - Interoperability - Linked-Data

FAIDARE: FAIR Data-finder for Agronomic Research

It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.