Explore projects

Quicly install docker on an Ubuntu based machine

DRAP is a De novo Rna Assembly Pipeline allowing to clean and filter RNA-seq De novo assemblers results to get the most compact and complete set of transcripts.

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.

simulateur de l'invasion du moustique Aedes

PAQmiR : Prediction Annotation and Quantification of miRNA with miRDeep2

Java library for metabolic networks

Explores a neo4j database according to some application logic

Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.

code de couplage 2d/1d sur le paysage SELOMMES

Ping a machine durant the reboot

XyDyS (Xylogenesis Dynamics Simulator) is a software for interactive exploration of computational models of wood formation.

Project used to manage security for In-Sylva Information System

Project dedicated to source managment. It allows user to upload data in the system

Annotation pipeline (transform SGBDR/CSV data to rdf)