Explore projects

L’objectif de l’atelier est d’intégrer et d’analyser des données omiques hétérogènes via des approches statistiques notamment disponibles dans les packages R (MixOmics, iClusterPlus, MOFA2).

sweep - Spatial Weather and Environmental datas Extraction Package

The sweep package aims to facilitate the extraction of environmental data from various cartographic or spatial sources or APIs. It allows for the retrieval of this information using specific coordinates or spatial grids. This package also formats the extracted data in a way that makes it easily exploitable for further analysis.

Présentation au format RMarkdown réalisée avec 'Xaringan' de formation au package R 'airGRiwrm'

Kernelized HAplotype-based MIXed model association mapping (KHAMIX)

Solves kernel ridge regression within the the mixed model framework. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available.

This repository contains the refpop R scripts, for achieving reproducible data analysis and results, according to the FAIR principles

Shiny App to explore MetaPDOCheese metagenomic shotgun data.

R package for regression and discrimination, with special focus on chemometrics and high-dimensional data

Training material for package rchemo

Helper for using Nextcloud client command line tool nextcloudcmd with log analysis and alert sending through Mattermost in case of sync issues.