Explore projects

massXpert (of the http://www.msxpertsuite.org software collection) is a program that allows one to define brand new polymer chemistry definitions, to use them to define polymer sequences and to perform a large array of chemical simulations on them.

GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)

A library that contains a subset of the ProteoWizard libpwiz library with code mainly aimed at loading MS files (XML-based and MGF).

R'MES is a tool for studying word frequencies in biological sequences.

libmass is a C++ static library that is referenced from other projects.

The libmass static library is designed to enshrine the non-gui functionalities needed by the following two projects:

msXpertSuite/massXpert; msXpertSuite/mineXpert2.

libmass has a companion GUI library, libmassgui , that is designed to enshrine the GUI functionalities needed by the same two projects above.

Pour projets SeaTech sur la Fast Marching Method

libmassgui is a C++ static library that is referenced from other projects. The libmassgui static library is designed to enshrine the gui functionalities needed by the following two projects:

msXpertSuite/massXpert; msXpertSuite/mineXpert2.

libmassgui has a companion GUI library, libmass , that is designed to enshrine the non-GUI functionalities needed by the same two projects above.

pubilc repository for the Ambhas groundwater model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/ambhas_cpp/

pubilc repository for the PumpPotential pump flow model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/pump-potential/

pubilc repository for the GroundWaterNitrogen nitrogen content in groundwater model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/groundwaternitrogen/

pubilc repository for the ASCROM crop model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/ascrom/

pubilc repository for the MF1_2 farm model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/mf1_2/

i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution

set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....

This project is a custom version of CB-Geo MPM.

Decloud is a framework to remove clouds in Sentinel-2 images from joint Sentinel-1 (SAR) and Sentinel-2 (Optical) images or time series.

GSpace is a simulator for large genomic data, based on a generation-by-generation coalescent that takes into account small population size, recombination, and isolation by distance.

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

Remote module for Orfeo ToolBox