Some scripts for the methylation analysis of the ChickStress project.
UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase
NGSPipelines integrates pipelines and user interfaces to help biologists to analyse data outputed from biological applications such as RNA-seq, sRNA-seq, Chip-Seq, BS-seq, and so on.
"clariTE.pl" is a program that post process the xm output file of RepeatMasker.
Tutorial example for creation of a snakemake workflow using a singularity container on a hpc
Multiple is a program for de novo discovery of DNA motifs
corresponding to Transcription Factor binding sites based on a
probabilistic model of the DNA sequence that incorporates expression
data as covariates.
A gene finding software for eukaryotic and prokaryotic organisms.