Commits · master · Cedric Cabau / DRAP

Apr 10, 2020

Fix meta_filter_complete: display transdecoder ending message only if filter... · d3eff205

Cedric Cabau authored 4 years ago

Fix meta_filter_complete: display transdecoder ending message only if filter is orf; Add in house link to fastq_illumina_filter on doc/install.html

d3eff205

May 27, 2019
- Fix typo · d494f5c6
  Philippe Bardou authored 5 years ago
  
  d494f5c6
May 24, 2019
- Add release 1.92 · 20949016
  Cedric Cabau authored 5 years ago
  
  20949016
- Update doc after the substitution of the embedded transrate by a patch · bcec2fb1
  Cedric Cabau authored 5 years ago
  
  bcec2fb1
- Add index number to samse error file regex · 46131bad
  Cedric Cabau authored 5 years ago
  
  46131bad
May 21, 2019
- Modify regex in sub dbg_complete for Trinity-v2.8 compatibility · 387e6804
  Cedric Cabau authored 5 years ago
  
  387e6804
- Update Dockerfile, remove drap-transrate embedded version and add transrate patch · 65509a21
  Cedric Cabau authored 5 years ago
  
  65509a21
- Add empty file to force git to push the database directory · b9b6f58e
  Cedric Cabau authored 5 years ago
  
  b9b6f58e
May 20, 2019
- To drap-v1.92 · 4dbead96
  Cedric Cabau authored 5 years ago
  
  4dbead96
May 16, 2019
- Start with clean master branch · 2362b6bb
  Cedric Cabau authored 5 years ago
  
  2362b6bb
- Remove tags directory · d62ca5e1
  Cedric Cabau authored 5 years ago
  
  d62ca5e1
Dec 21, 2018
- Fix regex in write_jobs_files.pl line 108 and DRAP release URL · b39f5eb8
  Cedric Cabau authored 6 years ago
  
  b39f5eb8
Dec 13, 2018
- Create archive for the version 1.91 · b8e9761b
  Cedric Cabau authored 6 years ago
  
  b8e9761b
- Remove archive for the version 1.91 · 623cca19
  Cedric Cabau authored 6 years ago
  
  623cca19
- Create archive for the version 1.91 · e77c8a4a
  Philippe Bardou authored 6 years ago
  
  e77c8a4a
Mar 23, 2018
- Forgotten commits · 94b7dcd3
  Cedric Cabau authored 7 years ago
  
  94b7dcd3
- Fix various bugs · af2cc265
  Cedric Cabau authored 7 years ago
  
  af2cc265
- Embed custom version of transrate · 1e12a748
  Cedric Cabau authored 7 years ago
  
  1e12a748
- runMeta now accepts a list of assembly fasta files · 7e7ad652
  Cedric Cabau authored 7 years ago
  
  7e7ad652
- Fix various bugs · 7d2d49c9
  Cedric Cabau authored 7 years ago
  
  7d2d49c9
- Embed custom version of transrate · 62ebbd4b
  Cedric Cabau authored 7 years ago
  
  62ebbd4b
- Documentation update · febde623
  Cedric Cabau authored 7 years ago
  
  febde623
- Add exec right to seqclean binaries · 19e1fd42
  Cedric Cabau authored 7 years ago
  
  19e1fd42
- Create genologin-slurm branch · dd8a1899
  Cedric Cabau authored 7 years ago
  
  dd8a1899
Jan 26, 2018
- runAssessment: fix transrate command by joining fastq with commas and not... · 7a81aeef
  Cedric Cabau authored 7 years ago
  
  runAssessment: fix transrate command by joining fastq with commas and not spaces; Add tmp dir to busco command
  7a81aeef
Oct 02, 2017
- Fix bug for shifting to hypermemq: totalMem=h_vmem*n_cpu · 0a03ec67
  Cedric Cabau authored 7 years ago
  
  0a03ec67
May 24, 2017
- Encrypt email address on DRAP website · 64e2b1f5
  Cedric Cabau authored 7 years ago
  
  64e2b1f5
- Update documentation for busco version 3.0 · a73a4056
  Cedric Cabau authored 7 years ago
  
  a73a4056
- Update documentation for busco version 3.0 · a45539f8
  Cedric Cabau authored 7 years ago
  
  a45539f8
May 23, 2017
- Update documentation for busco version 3.0 · 4f344fd0
  Cedric Cabau authored 7 years ago
  
  4f344fd0
- Fix Dockerfile for busco version 3.0 · fd834042
  Cedric Cabau authored 7 years ago
  
  fd834042
- Move to busco version 3.0 · 828c4f49
  Cedric Cabau authored 7 years ago
  
  828c4f49
May 22, 2017
- Fix minor bugs in version 1.91 · c4f01c8d
  Cedric Cabau authored 7 years ago
  
  c4f01c8d
- Fix minor bugs in version 1.91 · 9c829780
  Cedric Cabau authored 7 years ago
  
  9c829780
Apr 20, 2017
- Set default memory reservation · 0cd8758c
  Cedric Cabau authored 7 years ago
  
  0cd8758c
- Update Dockerfile modification date · ad276597
  Cedric Cabau authored 7 years ago
  
  ad276597
- Remove parallel_fill reservation: run all threads on the MASTER slot · d3e11630
  Cedric Cabau authored 7 years ago
  
  d3e11630
Apr 19, 2017
- Get n cpu for bwa.pl from drap.cfg · 65b0cd8c
  Cedric Cabau authored 7 years ago
  
  65b0cd8c
Apr 18, 2017
- Create tag drap-v1.91 · 04b6ea7c
  Cedric Cabau authored 7 years ago
  
  04b6ea7c
- Add BUSCO_plot to available commands · 4f2bff24
  Cedric Cabau authored 7 years ago
  
  4f2bff24