Commits · master · Cedric Cabau / DRAP

May 21, 2019
- Update Dockerfile, remove drap-transrate embedded version and add transrate patch · 65509a21
  Cedric Cabau authored 5 years ago
  
  65509a21
May 20, 2019
- To drap-v1.92 · 4dbead96
  Cedric Cabau authored 5 years ago
  
  4dbead96
May 16, 2019
- Start with clean master branch · 2362b6bb
  Cedric Cabau authored 5 years ago
  
  2362b6bb
Mar 23, 2018
- Create genologin-slurm branch · dd8a1899
  Cedric Cabau authored 7 years ago
  
  dd8a1899
Apr 18, 2017
- Create tag drap-v1.91 · 04b6ea7c
  Cedric Cabau authored 7 years ago
  
  04b6ea7c
- Move from version 1.9 to 1.91 · ed4095dc
  Cedric Cabau authored 7 years ago
  
  ed4095dc
- Fix our getOptions usage with parameters with multiple values · 15179a5e
  Cedric Cabau authored 7 years ago
  
  15179a5e
Mar 08, 2017
- Fix bug on recovery after crash before rmbt step · cbcab3ba
  Cedric Cabau authored 8 years ago
  
  cbcab3ba
Jan 18, 2017
- Trunk believes last version (i.e. 1.9) · 9930521e
  Cedric Cabau authored 8 years ago
  
  9930521e
Dec 14, 2016
- LocalScheduler parallelization; update documentation; trinity 2.3; busco v2 · 06a205e5
  Cedric Cabau authored 8 years ago
  
  06a205e5
Sep 28, 2016
- Add khmer normalization, compliant with Trinity 2.2.0 · 43ad4015
  Cedric Cabau authored 8 years ago
  
  43ad4015
May 27, 2016
- Add option cfg-file to execute DRAP with a user config file. Uniformize parameters typo · 88f983ff
  Cedric Cabau authored 8 years ago
  
  88f983ff
May 17, 2016
- New functionnality: BUSCO added to runAssessment · c961b888
  Cedric Cabau authored 8 years ago
  
  c961b888
Oct 02, 2015
- Aggregate all configuration files ; create cfg/drap.cfg · 04abffed
  Cedric Cabau authored 9 years ago
  
  04abffed
Oct 01, 2015
- Fix bug with out dir · 1e2ad553
  Frederic Escudie authored 9 years ago
  
  1e2ad553
Sep 30, 2015
- Add rating procedure checking · c5aea906
  Cedric Cabau authored 9 years ago
  
  c5aea906
- Import qarray in src. · a7a5730c
  Frederic Escudie authored 9 years ago
  
  a7a5730c
Sep 29, 2015
- Fix regression in transrate. · d7b2b08f
  Frederic Escudie authored 9 years ago
  
  d7b2b08f
Sep 28, 2015
- Change cfg/main extension (cfg to sh). · 7f39e816
  Frederic Escudie authored 9 years ago
  
  7f39e816
Sep 25, 2015
- Fix regression at r248. · c516c345
  Frederic Escudie authored 9 years ago
  
  Report transrate only with paired-end.
  c516c345
- No commit message · 29a851fb
  Frederic Escudie authored 9 years ago
  
  No commit message
  29a851fb
- Fix bug with scoring in report. · 7c7e5fe1
  Frederic Escudie authored 9 years ago
  
  7c7e5fe1
- Fix bug with scoring in report. · 8da84d48
  Frederic Escudie authored 9 years ago
  
  8da84d48
Sep 24, 2015
- Add transrate in report. · 02308160
  Frederic Escudie authored 9 years ago
  
  02308160
- Add license tag. · 97ba8ac3
  Frederic Escudie authored 9 years ago
  
  97ba8ac3
- Correct some bugs in error checking procedure · ef8ecaa9
  Cedric Cabau authored 9 years ago
  
  ef8ecaa9
Sep 23, 2015
- Do not run transrate with the same R1/R2 in meta-asm of asm with same read sets · 9ca8c4d7
  Cedric Cabau authored 9 years ago
  
  9ca8c4d7
- Add rating assembly procedure · a00186f4
  Cedric Cabau authored 9 years ago
  
  a00186f4
Sep 17, 2015
- Add runCheck. · 3fc102e2
  Frederic Escudie authored 9 years ago
  
  3fc102e2
Sep 16, 2015
- Add argument rm_root_dir to clean_directory sub · 674f766e
  Cedric Cabau authored 9 years ago
  
  674f766e
Sep 10, 2015
- submitJob now able to submit jobs with stdout/stderr redirection · cf152b6e
  Cedric Cabau authored 9 years ago
  
  cf152b6e
- Add execution rights. · 35d75474
  Frederic Escudie authored 9 years ago
  
  35d75474
- Check the report rsync result. · fda40df7
  Frederic Escudie authored 9 years ago
  
  fda40df7
Sep 09, 2015
- unalias rm commands. · de650004
  Frederic Escudie authored 9 years ago
  
  de650004
Sep 07, 2015
- Correct typo in POD · c8689462
  Cedric Cabau authored 9 years ago
  
  c8689462
Sep 01, 2015
- Submit all jobs through bin/submitJob · f2acd77b
  Cedric Cabau authored 9 years ago
  
  f2acd77b
Jun 19, 2015
- POD update · 0e2d7601
  Cedric Cabau authored 9 years ago
  
  0e2d7601
May 21, 2015
- Keep only source directory basename for RMBT report · 1da674d6
  Cedric Cabau authored 9 years ago
  
  1da674d6
May 07, 2015
- Correct typo in pending_rmbt job submission · 65f7093a
  Cedric Cabau authored 9 years ago
  
  65f7093a
May 06, 2015
- Change RMBT pending policy and eXpress command line in runMeta · 4d41371b
  Cedric Cabau authored 9 years ago
  
  4d41371b

Admin message