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Commit f674dc73 authored by Joseph Tran's avatar Joseph Tran
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Merge branch 'fix_bioconductor_version'

parents 5cb4e9cc 2ad2d893
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......@@ -3,7 +3,7 @@ options(repos=structure(c(CRAN="https://cran.rstudio.com/")))
# bioconductor base
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install(version = "3.14", ask = FALSE)
BiocManager::install(version = "3.12", ask = FALSE)
# bioconductor packages
BiocManager::install(c("edgeR", "Rgraphviz", "biomaRt", "topGO", "limma", "DESeq2", "cummeRbund", "Biostrings", "GenomicRanges", "Rsamtools", "Glimma", "Rgraphviz", "ComplexHeatmap", "goSTAG", "coseq", "mixOmics", "iClusterPlus", "MOFA2"))
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