Commits · 13be85a06e16b235a1d85a6d6e7c4b6c3a145876 · UMR GDEC / magatt · GitLab

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Jan 17, 2020
- Final version of blatMapping pipeline · 13be85a0
  Helene Rimbert authored 5 years ago
  
  13be85a0
Dec 20, 2019
- add result directory to gitignore file, remove markersIds from mapping pipeline · 7465d454
  Helene Rimbert authored 5 years ago
  
  7465d454
Dec 17, 2019
- new snakemake rule geneAnchoring.smk · 16d31b3b
  Helene Rimbert authored 5 years ago
  
  16d31b3b
Dec 16, 2019
- add indexing of reference sequences with samtools faidx · 479d76b6
  Helene Rimbert authored 5 years ago
  
  479d76b6
- update snakemake rules · 953851b9
  Helene Rimbert authored 5 years ago
  
  953851b9
- revert from nextflow to snakemake · 5b5d9130
  Helene Rimbert authored 5 years ago
  
  5b5d9130
Sep 16, 2019
- new config cluster.json for slurm compatibility · cf4d67c7
  Helene Rimbert authored 5 years ago
  
  cf4d67c7
Jul 10, 2019
- reformat gmap.smk · 674db69b
  Helene Rimbert authored 5 years ago
  
  674db69b
Jul 05, 2019
- BUG: output directory not detected by snakemake. needed to add directory()... · 32047fe2
  Helene Rimbert authored 5 years ago
  
  BUG: output directory not detected by snakemake. needed to add directory() statement for the gmapstats output.
  32047fe2
- add gmap.smk rules · 9f3e8b06
  Helene Rimbert authored 5 years ago
  
  9f3e8b06