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Commit d553b5f7 authored by Helene Rimbert's avatar Helene Rimbert
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correct missing tag in recalcGmapRescue rule

parent 62df6545
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...@@ -60,7 +60,7 @@ rule gmapRescue: ...@@ -60,7 +60,7 @@ rule gmapRescue:
rule recalcGmapRescue: rule recalcGmapRescue:
message: "Recalc the coordinates of the GMAP on target GFF3 files for chromosome {wildcards.chrom}" message: "Recalc the coordinates of the GMAP on target GFF3 files for chromosome {wildcards.chrom}"
input: config['results']+'/4.gmapRescue/{chrom}.target.gff3', input: gff=config['results']+'/4.gmapRescue/{chrom}.target.gff3',
output: temp(config['results']+'/4.recalcGmap/{chrom}/recalc.gff3') output: temp(config['results']+'/4.recalcGmap/{chrom}/recalc.gff3')
params: anchoringDir=config['results']+'/3.mapping/{chrom}', params: anchoringDir=config['results']+'/3.mapping/{chrom}',
bindir=os.getcwd() bindir=os.getcwd()
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