remove temporary fasta files to loawer disk usage. lower coverage and identity...
remove temporary fasta files to loawer disk usage. lower coverage and identity threshold in gmap rescue
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- bin/gmapRescue.sh 6 additions, 5 deletionsbin/gmapRescue.sh
- bin/microMappingPipeline.py 2 additions, 2 deletionsbin/microMappingPipeline.py
- bin/recalcCoordsFromBlat.py 2 additions, 2 deletionsbin/recalcCoordsFromBlat.py
- bin/reformatGmapWGGFF.py 10 additions, 9 deletionsbin/reformatGmapWGGFF.py
- bin/renameGffID.py 19 additions, 19 deletionsbin/renameGffID.py
- cluster-sibi.json 22 additions, 0 deletionscluster-sibi.json
- config.yaml 16 additions, 16 deletionsconfig.yaml
- report/dag.pdf 0 additions, 0 deletionsreport/dag.pdf
- report/dag.png 0 additions, 0 deletionsreport/dag.png
- report/rulegraph.pdf 0 additions, 0 deletionsreport/rulegraph.pdf
- report/rulegraph.png 0 additions, 0 deletionsreport/rulegraph.png
- rules/bedtoolsClosest.smk 33 additions, 30 deletionsrules/bedtoolsClosest.smk
- rules/geneAnchoring.smk 7 additions, 4 deletionsrules/geneAnchoring.smk
- rules/preprocessGenomes.smk 2 additions, 8 deletionsrules/preprocessGenomes.smk
- rules/preprocessISBP.smk 7 additions, 16 deletionsrules/preprocessISBP.smk
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