NEW : ISBPs extraction and mapping added in the begining of the pipeline (0fa68d60) · Commits · UMR GDEC / magatt · GitLab

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0fa68d60

Commit 0fa68d60 authored 1 year ago by Helene Rimbert

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NEW : ISBPs extraction and mapping added in the begining of the pipeline

parent 36d9a8d6

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Tags xtpcpp_0.3.9-2

1 merge request!10NEW : ISBPs extraction and mapping added in the begining of the pipeline

Changes 9

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README.md 5 additions, 10 deletions

README.md
cluster-hpc2.json 6 additions, 0 deletions

cluster-hpc2.json
config.yaml 8 additions, 2 deletions

config.yaml
envs/environment.yml 1 addition, 0 deletions

envs/environment.yml
rules/bedtoolsClosest.smk 4 additions, 4 deletions

rules/bedtoolsClosest.smk
rules/checkCds.smk 2 additions, 2 deletions

rules/checkCds.smk
rules/geneAnchoring.smk 14 additions, 14 deletions

rules/geneAnchoring.smk
rules/preprocessGenomes.smk 5 additions, 5 deletions

rules/preprocessGenomes.smk
rules/preprocessISBP.smk 24 additions, 6 deletions

rules/preprocessISBP.smk

with 69 additions and 43 deletions

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