- Also add test for variable declared in setup.R

Refs #34

- also avoid to delete template when an error occurred during knit

Refs #34

add allow_duplicate_labels argument to render_report(s) which is FALSE by default in line with recommandation of https://bookdown.org/yihui/rmarkdown-cookbook/duplicate-label.html

Fix #34

Fix #30

Refs #30

Fix #31

Resolve "Allow the use of rticles templates"

Closes #29

See merge request !9

Refs #29

Refs #29

Refs #29

Refs #29

Refs #29

Resolve "render_reports: working directory is changed after run"

Closes #27

See merge request !8

Refs #8

Fix #24, #26

Merge branch '25-loadconfig-and-getdatapath-from-fairified-package-are-not-available-in-rmd-documents' into 'main'

Resolve "`loadConfig` and `getDataPath` from fairified package are not available in Rmd documents"

Closes #25

See merge request !6

Refs #25

Refs #25

Refs #25

Refs #25

If fairify is attached after the fairified project this patch search for the good version of getDataPath and loadConfig

Also add the possibility to not search for user config.

Refs #25

- call render_book via Rscript in order to not pollute the knitting environment with fairify package
- use before_chapter_script for setup a report
instead of letting the user put a call to setup.R in the Rmarkdown report.
- copy of templates is operated during knit by setup.R

Refs #25

Refs #5

Refs #5

See https://rdrr.io/cran/pkgload/man/load_all.html

Refs #23

Resolve "Change the template strategy: allow custom templates from packages"

Closes #23

See merge request !4

For fixing working directory to the report directory when rendering a report

Refs #23

- templates are copied from package inst/templates during render
- handling of dependencies between templates
- setup.R is template dependant now
- _output.yml is also template dependant and completed recursively through dependency chain

Refs #23

- remove copy of templates in create_reports
- create reports folder if needed
- check template existence
- add .template_dependencies file

Refs #23

Resolve "Add a menu with the list of reports in pkgdown"

Closes #22

See merge request !3

Refs #22

Refs #4

Fix #21