Commits · a47a5d838240b2317e2b2475042891c38207feda · SVdetection / svlib

Dec 03, 2019
- adding duplicate informations with the new identifiers · a47a5d83
  Thomas Faraut authored 5 years ago
  
  a47a5d83
Nov 29, 2019
- new implementation of annotation using vcfwrapper · 4f118e1d
  Thomas Faraut authored 5 years ago
  
  4f118e1d
- Annotate.py -> annotation.py · 5eff6941
  Thomas Faraut authored 5 years ago
  
  5eff6941
Nov 28, 2019
- supp_reads becomes max support reads · 7840de6c
  Thomas Faraut authored 5 years ago
  
  7840de6c
Nov 27, 2019
- modified annotation · 85d17402
  Thomas Faraut authored 5 years ago
  
  85d17402
- Annotate uses SVReader · 3ab9cd8e
  Thomas Faraut authored 5 years ago
  
  3ab9cd8e
- AnnotatedRecord.py becomes Annotate.py · b36c3609
  Thomas Faraut authored 5 years ago
  
  b36c3609
- adding AnnotatedRecord · dddad31d
  Thomas Faraut authored 5 years ago
  
  dddad31d
- new pindel specific filter · 68b5c6df
  Thomas Faraut authored 5 years ago
  
  68b5c6df
- Annotate uses SVReader · d26a53fe
  Thomas Faraut authored 5 years ago
  
  d26a53fe
- AnnotatedRecord.py becomes Annotate.py · 96ab3af1
  Thomas Faraut authored 5 years ago
  
  96ab3af1
- new svreader · 4ed7e17f
  Thomas Faraut authored 5 years ago
  
  4ed7e17f
- adding AnnotatedRecord · 8ece2341
  Thomas Faraut authored 5 years ago
  
  8ece2341
- modify pindel specific filter · cc7adfec
  Thomas Faraut authored 5 years ago
  
  cc7adfec
Nov 22, 2019
- corrected pindel filter · 0de3d4d1
  Thomas Faraut authored 5 years ago
  
  0de3d4d1
Oct 31, 2019
- new pindel specific filter · a65df1e7
  Thomas Faraut authored 5 years ago
  
  a65df1e7
Dec 04, 2018
- - removing filtering for gaps for genomestrip · 814c02a2
  Thomas Faraut authored 6 years ago
  
  - intersect is now required to be reciprocal for duplicate reoval
  814c02a2
Oct 19, 2018
- adding batch id to record id · 070ff8a5
  Thomas Faraut authored 6 years ago
  
  070ff8a5
Aug 23, 2018
- remove_duplicates a O(n) implementation · 55c0b796
  Thomas Faraut authored 6 years ago
  
  55c0b796
Aug 06, 2018
- new filter for lumpy · 19b663fd
  Thomas Faraut authored 6 years ago
  
  19b663fd
Aug 03, 2018
- sef is self ! · d5422db0
  Thomas Faraut authored 6 years ago
  
  d5422db0
- correcting a bug in remove_duplicate in __init__ · b987ff07
  Thomas Faraut authored 6 years ago
  
  b987ff07
Aug 01, 2018
- correctting merge problems · d3425681
  Thomas Faraut authored 6 years ago
  
  d3425681
- removing duplicates fixed · fd2248a0
  Thomas Faraut authored 6 years ago
  
  fd2248a0
- Fix typo · a89cdd5a
  Floreal Cabanettes authored 6 years ago
  
  a89cdd5a
Jul 31, 2018
- only exact duplicates are merged · 703d3296
  Thomas Faraut authored 6 years ago
  
  703d3296
- removing duplicate calls in pindel (caused by overlapping window calls) · b4fa4174
  Thomas Faraut authored 6 years ago
  
  b4fa4174
Jul 06, 2018
- new filter · 471bbedf
  Thomas Faraut authored 6 years ago
  
  471bbedf
Jun 14, 2018
- fixing bug in lumpy parser · 2f124943
  Thomas Faraut authored 6 years ago
  
  2f124943
Jun 12, 2018
- Fix return · f2a499b0
  Floreal Cabanettes authored 6 years ago
  
  f2a499b0
Jun 11, 2018
- Fix svtype · 2d8f851c
  Floreal Cabanettes authored 6 years ago
  
  2d8f851c
Jun 08, 2018
- new filters according to recomendations · cc271741
  Floreal Cabanettes authored 6 years ago
  
  cc271741
Jun 01, 2018
- Initial commit · 765e8724
  Floreal Cabanettes authored 6 years ago
  
  765e8724

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