Commits · 8d0ca0fc10b052ae4eedee35ee3d84ba4ef4b7c7 · SVdetection / cnvpipelines

Jul 11, 2019
- bwa execution mode · 8d0ca0fc
  Thomas Faraut authored 5 years ago
  
  8d0ca0fc
Jul 10, 2019
- adding vcf-sort · b4093cf9
  Thomas Faraut authored 5 years ago
  
  b4093cf9
- use conda delly · 23ef70cc
  Thomas Faraut authored 5 years ago
  
  23ef70cc
- removing link for referencebundle · 9300b44a
  Thomas Faraut authored 5 years ago
  
  9300b44a
- adding a test dir with README · 40fe470b
  Thomas Faraut authored 5 years ago
  
  40fe470b
- new README · 6c717382
  Thomas Faraut authored 5 years ago
  
  6c717382
- Update README.md · 68c43a9c
  Thomas Faraut authored 5 years ago
  
  68c43a9c
- removing repeatmasker and perl · d1540ffd
  Thomas Faraut authored 5 years ago
  
  d1540ffd
- new complete install · 23152661
  Thomas Faraut authored 5 years ago
  
  23152661
Jul 09, 2019
- updating pirs · 00b8c4a0
  Thomas Faraut authored 5 years ago
  
  00b8c4a0
- updating popsim · 9924d782
  Thomas Faraut authored 5 years ago
  
  9924d782
- updating lib · 02462ca4
  Thomas Faraut authored 5 years ago
  
  02462ca4
- updating lib · 98b8440e
  Thomas Faraut authored 5 years ago
  
  98b8440e
- adding a test folder · 964cdc4a
  Thomas Faraut authored 5 years ago
  
  964cdc4a
- new readme · 0bc9415f
  Thomas Faraut authored 5 years ago
  
  0bc9415f
- updating lib · 944249bf
  Thomas Faraut authored 5 years ago
  
  944249bf
- fixed name in env.yaml · c9f54294
  Thomas Faraut authored 5 years ago
  
  c9f54294
- Update README.md · 827bb6a4
  Thomas Faraut authored 5 years ago
  
  827bb6a4
- Update README.md · e1a626ae
  Thomas Faraut authored 5 years ago
  
  e1a626ae
- new README · fc7196cc
  Thomas Faraut authored 5 years ago
  
  fc7196cc
- installing genomestrip using conda · 262743e3
  Thomas Faraut authored 5 years ago
  
  262743e3
Jul 08, 2019
- new installation procedure · b5c5e280
  Thomas Faraut authored 5 years ago
  
  b5c5e280
Jul 05, 2019
- new readme · ecbe823a
  Thomas Faraut authored 5 years ago
  
  ecbe823a
- new installation procedure · 4abab084
  Thomas Faraut authored 5 years ago
  
  4abab084
Jul 03, 2019
- updating popsim · 221bea05
  Thomas Faraut authored 5 years ago
  
  221bea05
- Merge branch 'master' of forgemia.inra.fr:svdetection/cnvpipelines · 2d22dbd9
  Thomas Faraut authored 5 years ago
  
  2d22dbd9
- some memory and trhead parameter reconfiguration · dc3fc525
  Thomas Faraut authored 5 years ago
  
  dc3fc525
May 27, 2019
- Merge branch 'devrefbundle' into 'master' · b9727d76
  Thomas Faraut authored 5 years ago
  
  some comestic changes See merge request !13
  b9727d76
- some comestic changes · e8d91743
  Thomas Faraut authored 5 years ago
  
  e8d91743
- some more explicit messages. Correcting positions for gaps · 8c8bba97
  Thomas Faraut authored 5 years ago
  
  8c8bba97
Feb 15, 2019
- Updating lib · f9dacd58
  Thomas Faraut authored 6 years ago
  
  f9dacd58
Feb 05, 2019
- Update popsim ae01d89 · 4947cd8f
  Mathieu Charles authored 6 years ago
  
  4947cd8f
- Duplication support in simulation;Creation of the sample.list containing all... · c1c72ff8
  Mathieu Charles authored 6 years ago
  
  Duplication support in simulation;Creation of the sample.list containing all samples, additionnaly to sample.list.# for batch
  c1c72ff8
Jan 21, 2019
- Update remote popsim URL · a11c6b43
  Celine Noirot authored 6 years ago
  
  a11c6b43
Jan 17, 2019
- removing tab · de542420
  Thomas Faraut authored 6 years ago
  
  de542420
- bwam in cluster.yaml set to 23h, detect_region_to_exclude modified · 9fe53a17
  Thomas Faraut authored 6 years ago
  
  9fe53a17
Dec 14, 2018
- bug correction · a6854300
  Thomas Faraut authored 6 years ago
  
  a6854300
Dec 12, 2018
- - pindel back to --max_range_index 3 · 9b50863b
  Thomas Faraut authored 6 years ago
  
  - gstrip_preprocess now requires 16Gb of memory
  9b50863b
Dec 05, 2018
- removing izip and pysamstats import · e6a8ad6a
  Thomas Faraut authored 6 years ago
  
  e6a8ad6a
Dec 04, 2018
- - delly ex is now mine · 5225e199
  Thomas Faraut authored 6 years ago
  
  - get_regions to exclude uses not mad
  5225e199