adding start_batch_nb

snakecnv/common.smk

@@ -228,8 +228,10 @@ class Detection(Command):
         self.tools = self.params['tools']
         self.tools_sv_types = self.set_svtype_tools()
 
+        start_batch_nb = self.params["start_batch_nb"]
+
         self.size_batches = self.get_size_batches()
-        self.sample_batches = self.set_sample_batches()
+        self.sample_batches = self.set_sample_batches(start_batch_nb)
         # self.chrom_batches = self.get_all_chrom_batches()
 
         # TODO have to clean this