Fix missing config

snakecnv/Snakefile

@@ -15,7 +15,7 @@ os.environ["PYTHONPATH"] = os.path.join(ROOTPATH, "lib")
 from svrunner_utils import getMeanInsertSize, getChromLength, get_insert_size
 from svsnakemake_utils import SnakemakeUtils
 
-size_batches = int(config["batches"])
+size_batches = int(config["batches"] if "batches" in config else 1)
 size_batches = 5  # FOR DEBUG ONLY
 
 # TODO: raise the error only if genomestrip (or genomestrip genotype) is used)