Commits · c509209f05d15fc4708e67481eb4ae2ec6f05a97 · Philippe Bardou / cnvpipelines

Sep 10, 2019
- movin common.smk · 5fb94f26
  Thomas Faraut authored 5 years ago
  
  5fb94f26
- popsim fastq and fasta files are now temporary · e3bb89b7
  Thomas Faraut authored 5 years ago
  
  e3bb89b7
- made a file executable · a4750268
  Thomas Faraut authored 5 years ago
  
  a4750268
- adding popsimulation.smk · c4fa05a7
  Thomas Faraut authored 5 years ago
  
  c4fa05a7
- get_batches in mergebatch kept as the old version · 700e6ad1
  Thomas Faraut authored 5 years ago
  
  700e6ad1
- megebatches functionnal · 12125ec3
  Thomas Faraut authored 5 years ago
  
  12125ec3
- Preparing for simulation work-flow. · 7fe0baea
  Thomas Faraut authored 5 years ago
  
  Remaining problem commes from reference sequence "reference.fasta" absent at the beginning of the workflow.
  7fe0baea
- all snakefiles for refactor · 8492f706
  Thomas Faraut authored 5 years ago
  
  8492f706
- Pulled down update to submodule_dir · 9cdb9085
  Thomas Faraut authored 5 years ago
  
  9cdb9085
- new implementation · 869f27a0
  Thomas Faraut authored 5 years ago
  
  869f27a0
- clean unused files · 6b6b4d46
  Thomas Faraut authored 5 years ago
  
  6b6b4d46
- refbundle.smk becomes master · 38306668
  Thomas Faraut authored 5 years ago
  
  38306668
- reorganization for refbundle · d909ccac
  Thomas Faraut authored 5 years ago
  
  d909ccac
- new organization for detection · fd13c354
  Thomas Faraut authored 5 years ago
  
  fd13c354
- SnekamakeCommand py --> smk · 965bcf00
  Thomas Faraut authored 5 years ago
  
  965bcf00
- new factorization · 652f0410
  Thomas Faraut authored 5 years ago and Thomas Faraut committed 5 years ago
  
  652f0410
- new factorization · 84ce3509
  Thomas Faraut authored 5 years ago and Thomas Faraut committed 5 years ago
  
  84ce3509
- new installation procedures · 6b92b17b
  Thomas Faraut authored 5 years ago
  
  6b92b17b
- updating lib · 12e85039
  Thomas Faraut authored 5 years ago
  
  12e85039
- POLYMORPH becomes MONOMORH · 41801b24
  Thomas Faraut authored 5 years ago
  
  41801b24
- updating lib · 1659335c
  Thomas Faraut authored 5 years ago
  
  1659335c
- POLYMORPH becomes MONOMORH · 0b8646ec
  Thomas Faraut authored 5 years ago
  
  0b8646ec
Sep 09, 2019
- popsim fastq and fasta files are now temporary · f3c8d12b
  Thomas Faraut authored 5 years ago
  
  f3c8d12b
Sep 06, 2019
- made a file executable · 0adb92e3
  Thomas Faraut authored 5 years ago
  
  0adb92e3
- Adding bcftools and tabix to lumpysvtyperpy27.yaml · 60e269c5
  Thomas Faraut authored 5 years ago
  
  60e269c5
Sep 04, 2019
- adding popsimulation.smk · 654e5573
  Thomas Faraut authored 5 years ago
  
  654e5573
- get_batches in mergebatch kept as the old version · 8943f735
  Thomas Faraut authored 5 years ago
  
  8943f735
Sep 03, 2019
- megebatches functionnal · 9fe41545
  Thomas Faraut authored 5 years ago
  
  9fe41545
Aug 27, 2019
- Update lumpysvtyperpy27.yaml · db75b30e
  Thomas Faraut authored 5 years ago
  
  db75b30e
- Update lumpysvtyperpy27.yaml · 04e39643
  Thomas Faraut authored 5 years ago
  
  04e39643
- Update lumpysvtyperpy27.yaml · 914abc98
  Thomas Faraut authored 5 years ago
  
  914abc98
- Update lumpysvtyperpy27.yaml · eb46e8be
  Thomas Faraut authored 5 years ago
  
  eb46e8be
Aug 26, 2019

Preparing for simulation work-flow. · d7d57d96

Thomas Faraut authored 5 years ago

Remaining problem commes from reference sequence "reference.fasta" absent at the beginning of the workflow.

d7d57d96

Aug 19, 2019
- all snakefiles for refactor · 14de71ab
  Thomas Faraut authored 5 years ago
  
  14de71ab
Aug 16, 2019
- Pulled down update to submodule_dir · 0332e6cc
  Thomas Faraut authored 5 years ago
  
  0332e6cc
- new implementation · 751deaec
  Thomas Faraut authored 5 years ago
  
  751deaec
- clean unused files · afec1b63
  Thomas Faraut authored 5 years ago
  
  afec1b63
Aug 14, 2019
- refbundle.smk becomes master · 519a5fba
  Thomas Faraut authored 5 years ago
  
  519a5fba
- reorganization for refbundle · d325157d
  Thomas Faraut authored 5 years ago
  
  d325157d
- new organization for detection · b851d15d
  Thomas Faraut authored 5 years ago
  
  b851d15d

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