src/core/automaticfilterparameters.h

...re/identification_sources/identificationmascotdatfile.cpp

...core/identification_sources/identificationmascotdatfile.h

src/core/msrun.cpp

src/core/peptidextp.h

src/core/proteinxtp.cpp

src/core/qvalue/computeqvalues.cpp

src/core/qvalue/computeqvalues.h

src/core/tandem_run/tandembatchprocess.cpp

src/core/tandem_run/tandembatchprocess.h

src/core/tandem_run/tandemcondorprocess.cpp

src/core/tandem_run/tandemparameters.cpp

src/grouping/groupinggroup.cpp

src/grouping/ptm/ptmgroupingexperiment.cpp

src/grouping/ptm/ptmisland.cpp

src/grouping/ptm/ptmislandgroup.cpp

src/grouping/ptm/ptmislandsubgroup.cpp

src/grouping/ptm/ptmsamplescan.cpp

src/gui/about_dialog/aboutdialog.h

...i/choose_modification_dialog/choosemodificationdialog.cpp