check protein is OK

src/core/proteinmatch.cpp

@@ -44,6 +44,10 @@ const pappso::ProteinSp & ProteinMatch::getProteinSp() const {
 void ProteinMatch::setEvalue(pappso::pappso_double evalue) {
     _evalue = evalue;
 }
+
+pappso::pappso_double ProteinMatch::getEvalue() const {
+    return _evalue;
+}
 void ProteinMatch::setProteinSp(pappso::ProteinSp protein_sp) {
     _protein_sp = protein_sp;
 }

src/core/proteinmatch.h

@@ -37,6 +37,7 @@ public:
     
     const pappso::ProteinSp & getProteinSp() const;
     void setEvalue(pappso::pappso_double evalue);
+    pappso::pappso_double getEvalue() const;
     void setProteinSp(pappso::ProteinSp protein_sp);
     void addPeptideMatch(PeptideMatch * peptide_match);
     std::vector<PeptideMatch *> & getPeptideMatchList();

src/gui/protein_list_view/proteinlistwindow.cpp

@@ -58,6 +58,8 @@ ProteinListWindow::ProteinListWindow(QWidget *parent):
     _p_proxy_model->setDynamicSortFilter(true);
     ui->tableView->setModel( _p_proxy_model );
     ui->tableView->setSortingEnabled(true);
+    
+    connect(ui->tableView, SIGNAL(clicked(const QModelIndex &)), _p_proxy_model, SLOT(onTableClicked(const QModelIndex &)));
 }
 
 ProteinListWindow::~ProteinListWindow()

src/gui/protein_list_view/proteintablemodel.cpp

@@ -34,8 +34,15 @@ ProteinTableProxyModel::ProteinTableProxyModel(QObject *parent,ProteinTableModel
 
 bool ProteinTableProxyModel::filterAcceptsRow(int source_row,
         const QModelIndex &source_parent) const {
-    //return _protein_table_model_p->acceptRow(source_row);
-	  return true;
+    return _protein_table_model_p->acceptRow(source_row);
+    //return true;
+}
+
+void ProteinTableProxyModel::onTableClicked(const QModelIndex &index)
+{
+        qDebug() << "ProteinTableProxyModel::onTableClicked begin " << index.row();
+        qDebug() << "ProteinTableProxyModel::onTableClicked begin " << this->mapToSource(index).row();
+    _protein_table_model_p->onTableClicked(this->mapToSource(index));
 }
 
 bool ProteinTableProxyModel::lessThan(const QModelIndex & left, const QModelIndex & right) const {
@@ -44,8 +51,11 @@ bool ProteinTableProxyModel::lessThan(const QModelIndex & left, const QModelInde
     if (leftData.type() == QVariant::UInt) {
         return leftData.toUInt() < rightData.toUInt();
     }
-    if (leftData.type() == QVariant::Int) {
-        return leftData.toInt() < rightData.toInt();
+    if (leftData.type() == QVariant::UInt) {
+        return leftData.toUInt() < rightData.toUInt();
+    }
+    if (leftData.type() == QVariant::Double) {
+        return leftData.toDouble() < rightData.toDouble();
     }
     return leftData.toString() < rightData.toString();
     //if (leftData.type() == QVariant::DateTime) {
@@ -101,7 +111,7 @@ int ProteinTableModel::rowCount(const QModelIndex &parent ) const {
     return 0;
 }
 int ProteinTableModel::columnCount(const QModelIndex &parent ) const {
-    return 3;
+    return 4;
 }
 QVariant ProteinTableModel::headerData(int section, Qt::Orientation orientation, int role) const
 {
@@ -111,11 +121,13 @@ QVariant ProteinTableModel::headerData(int section, Qt::Orientation orientation,
             switch (section)
             {
             case 0:
-                return QString("group");
+                return QString("checked");
             case 1:
-                return QString("subgroup");
+                return QString("accession");
             case 2:
                 return QString("protein description");
+            case 3:
+                return QString("Evalue");
             }
         }
     }
@@ -143,10 +155,7 @@ QVariant ProteinTableModel::data(const QModelIndex &index, int role ) const {
         break;
     case Qt::DisplayRole:
         if (col == 0) {
-            if (_p_identification_group != nullptr) {
-
-                return QVariant ((quint16) _p_identification_group->getProteinMatchList().at(row)->getPeptideMatchList().size());
-            }
+            return QVariant();
         }
         if (col == 1) {
             if (_p_identification_group != nullptr) {
@@ -158,6 +167,20 @@ QVariant ProteinTableModel::data(const QModelIndex &index, int role ) const {
                 return _p_identification_group->getProteinMatchList().at(row)->getProteinSp().get()->getDescription();
             }
         }
+        if (col == 3) {
+            if (_p_identification_group != nullptr) {
+
+                return _p_identification_group->getProteinMatchList().at(row)->getEvalue();
+            }
+        }
+
+        if (col == 4) {
+            if (_p_identification_group != nullptr) {
+
+                return QVariant ((quint16) _p_identification_group->getProteinMatchList().at(row)->getPeptideMatchList().size());
+            }
+        }
+
         return QString("Row%1, Column%2")
                .arg(index.row() + 1)
                .arg(index.column() +1);
@@ -165,6 +188,21 @@ QVariant ProteinTableModel::data(const QModelIndex &index, int role ) const {
     return QVariant();
 }
 
+void ProteinTableModel::onTableClicked(const QModelIndex &index)
+{
+     int row = index.row();
+    int col = index.column();
+    if (col == 0) //add a checkbox to cell(1,0)
+        {
+            if ( _p_identification_group->getProteinMatchList().at(row)->isChecked()) {
+                _p_identification_group->getProteinMatchList().at(row)->setChecked(false);
+            }
+            else {
+                _p_identification_group->getProteinMatchList().at(row)->setChecked(true);
+            }
+            //emit dataChanged(index, index);
+        }
+}
 
 bool ProteinTableModel::acceptRow(int source_row) {
     if (_p_identification_group->isValid(_p_identification_group->getProteinMatchList().at(source_row))) {

src/gui/protein_list_view/proteintablemodel.h

@@ -41,8 +41,7 @@ public:
     bool lessThan(const QModelIndex & left, const QModelIndex & right) const override;
 
 public slots:
-    //void setMinGravity(double minGravity);
-    // void setMinDensity(double minDensity);
+    void onTableClicked(const QModelIndex &index);
 private:
     double m_minGravity;
     double m_minDensity;
@@ -62,7 +61,8 @@ public:
 
     void setIdentificationGroup(IdentificationGroup * p_identification_group);
     bool acceptRow(int source_row);
-
+public slots:
+    void onTableClicked(const QModelIndex &index);
 private :
     IdentificationGroup * _p_identification_group = nullptr;
 };