xtpcpp (0.4.4-3) buster, an other fix for issue #31

debian/changelog

+xtpcpp (0.4.4-3) buster; urgency=medium
+
+  * new package to fix issue #31
+
+ -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 24 Sep 2020 16:05:03 +0200
+
 xtpcpp (0.4.4-2) buster; urgency=medium
 
   * new package to fix issue #31

src/core/msrun.cpp

@@ -404,6 +404,7 @@ MsRun::getMsRunXicExtractorInterfaceSp()
     }
   qDebug();
   _msrun_reader_sp = this->findMsRunFile();
+  qDebug();
   if(_msrun_reader_sp != nullptr)
     {
 

src/gui/export/export_masschroq_dialog/exportmasschroqdialog.cpp

@@ -42,7 +42,7 @@ ExportMasschroqDialog::ExportMasschroqDialog(MainWindow *parent,
                                              WorkerThread *p_worker)
   : QDialog(parent), ui(new Ui::ExportMasschroqDialog)
 {
-  qDebug() << __FILE__ << " " << __FUNCTION__ << " " << __LINE__;
+  qDebug();
   mp_main = parent;
   ui->setupUi(this);
   this->setModal(true);

src/gui/workerthread.cpp

@@ -803,7 +803,12 @@ WorkerThread::checkMsrunFilePath(std::vector<MsRunSp> msruns)
           _p_work_monitor->message(tr("checking MS run file path for sample %1")
                                      .arg(msrun_sp->getSampleName()),
                                    i);
-          if(msrun_sp->findMsRunFile())
+
+          qDebug();
+          pappso::MsRunReaderSPtr msrunreader_sp = msrun_sp->findMsRunFile();
+
+          qDebug();
+          if(msrunreader_sp != nullptr)
             {
             }
           else
@@ -899,17 +904,24 @@ WorkerThread::doCheckMsrunFilePath(ProjectSp msp_project)
               .arg(msrun_sp.get()->getSampleName()),
             i);
 
-          if(msrun_sp->findMsRunFile())
+          qDebug();
+          pappso::MsRunReaderSPtr msrunreader_sp = msrun_sp->findMsRunFile();
+
+          qDebug();
+          if(msrunreader_sp != nullptr)
             {
               // msrun_sp->checkMsRunStatistics();
+              msrun_sp->freeMsRunReaderSp();
               msrun_sp = nullptr;
+              qDebug() << "file found";
             }
           else
             {
               // is_ok = false;
+              qDebug() << "file not found";
               break;
             }
-          msrun_sp->freeMsRunReaderSp();
+          // msrun_sp->freeMsRunReaderSp();
           i++;
         }
     }

src/gui/workerthread.h

@@ -103,6 +103,10 @@ class WorkerThread : public QObject
   void operationFailed(QString error);
   void findingBestMsrunForAlignmentFinished(MsRunSp msrun_sp);
   void bestMsrunForAlignmentGroupFinished(MsRunSp msrun_sp);
+  /** @brief check every msrun file path in project
+   * @return a null pointer if all msruns are found and a pointer to the msrun
+   * that was not found if so
+   */
   void checkingMsrunFilePathFinished(MsRunSp msrun_sp);
 
   private: