testing xic extractor with disk cache

src/utils/readspectrum.cpp

@@ -333,6 +333,7 @@ pappso::SpectrumSp SpectrumStore::getSpectrumSpFromMsRunSp(MsRun * msrun, unsign
 
 std::vector<pappso::MsRunXicSp> SpectrumStore::getXicSpFromMsRunSp(MsRun * p_msrun, const std::vector<pappso::MassRange> & mass_range_list, pappso::XicExtractMethod method) {
     qDebug() << "SpectrumStore::getXicSpFromMsRunSp begin" ;
+    pappso::MsRunXicExtractorFactory::getInstance().setTmpDir("/tmp");
     std::vector<pappso::MsRunXicSp> xic_sp_list;
     if (p_msrun == nullptr) {
         qDebug() << "SpectrumStore::getXicSpFromMsRunSp ERROR p_msrun == nullptr " ;
@@ -345,7 +346,7 @@ std::vector<pappso::MsRunXicSp> SpectrumStore::getXicSpFromMsRunSp(MsRun * p_msr
     if (p_msdatafile != nullptr) {
         auto it = _map_msrun_msrunxicextractor.find(p_msrun);
         if (it == _map_msrun_msrunxicextractor.end()) {
-            pappso::MsRunXicExtractorSp extractor = pappso::MsRunXicExtractorFactory::getInstance().buildMsRunXicExtractorPwizSp(*p_msrun);
+            pappso::MsRunXicExtractorSp extractor = pappso::MsRunXicExtractorFactory::getInstance().buildMsRunXicExtractorDiskSp(*p_msrun);
             
             _map_msrun_msrunxicextractor.insert(std::pair<MsRun *, pappso::MsRunXicExtractorSp>(p_msrun, extractor));
             extractor->setXicExtractMethod(method);