Not possible to run masschroq with masschroqml generated using xml identification reuslt
when trying to start masschroq with a masschroqml file generated using xml file the run stop with following error
MassChroQ encountered an error:
error reading masschroqML input file '/gorgone/pappso/moulon/users/thierry/20240221_marchadier_77/masschroq/20240221_marchadier_77_semi_10ppm.masschroqml' :
ERROR at line 2683 column 61
Error reading file /gorgone/pappso/moulon/users/thierry/20240221_marchadier_77/masschroq/20240221_marchadier_77_semi_10ppm.masschroqml :
error reading observed_in tag : error in msrun 'msrunb21' (in getPrecursorByScanNumber method): scan (MS level >=2) number 19608 does not exist