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Created with Raphaël 2.2.017Mar16975127Feb21141312107652131Jan302522212017922Dec212019166429Nov63231Oct30281910229Sep28272120191815141386231Aug3029282524232220Jul19187528Jun272319161514121198632131May302927262523954227Mar252420171615141198723Feb2221191413127Jan96521Dec86530Nov292726252423222131Oct2117151413121110975432130Sep2928272623222019131Aug302925242319Jul181630Jun2322172130May231612119429Apr28272622201915831Mar282322181615129728Feb252423229126Jan2422212019WIP: parameters for proteobenchnew object to collect project parametersi2masschroq (1.0.8-1~bookworm1) bookwormi2masschroq_1.0…i2masschroq_1.0.8-1_bookworm1generate ODS file for proteobench : tests neededvery bad bug concerning spectral count exports fixed (reported by Carine Machado)provide tandemng2015 in Windows setup.exe packagebetter pepxml modification handleri2masschroq (1.0.7-1~bookworm1) bookworm; urgency=mediumi2masschroq_1.0…i2masschroq_1.0.7-1_bookworm1fix for MSF pepxml readdo the trick to read MSF pepxml results on Bruker timstof converted by PAPPSOms++Merge branch 'main' of forgemia.inra.fr:pappso/i2masschroqImprove the README file as requested by one reviewer of the paper.emit signal when an R step is finishedfix proteobench exportMerge branch 'main' of forgemia.inra.fr:pappso/i2masschroqexport proteobencheditable text labelsCosmetic.Cosmetic.Merge branch 'main' of forgemia.inra.fr:pappso/i2masschroqFurther changes of XTPcpp to i2MassChroQ.Replace in cpp and h files sed -i 's/This file is part of XTPcpp/This file is part of i2MassChroQ/g'.Changed some filenames to wildcarded ones and added some other files.Add the FDR formula where FDR is first mentioned in the documentation.fix proteobench exportmodif getdfFDR definitionrename deepprot to specoms, FDR definition, tandemng suggestionexport normalized area if it existsexport normalized area if it existsgood proteobench exportdon't forget the last msrunWIP: first proteobench export, it works, but there is no shared peptidesWIP: export data to proteobenchrework MCQR GUI for shared peptidesi2masschroq (1.0.6-1~bookworm1) bookwormi2masschroq_1.0…i2masschroq_1.0.6-1_bookworm1fix mzidentml reader problem if there is no PSM at all for a fasta filei2masschroq (1.0.5-1~bookworm1) bookwormi2masschroq_1.0…i2masschroq_1.0.5-1_bookworm1MCQR labelfix metadata bug while reading ods file
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