read spectrum from identification source

src/core/identification_sources/identificationdatasource.h

@@ -25,6 +25,7 @@
 
 
 #include <pappsomspp/msrun/msrunid.h>
+#include <pappsomspp/spectrum/spectrum.h>
 #include <map>
 
 
@@ -43,6 +44,9 @@ public:
     const QString & getResourceName () const;
     void setMsRunSp (pappso::MsRunIdSp ms_run_sp);
     pappso::MsRunIdSp getMsRunSp () const;
+    /** @brief get the spectrum with scan number
+     * */
+    virtual pappso::SpectrumSp getSpectrumSp(unsigned int scan_number) const = 0;
 
 protected :
     QString _resource_name;

src/core/identification_sources/identificationxtandemfile.cpp

@@ -39,3 +39,8 @@ bool IdentificationXtandemFile::operator==(const IdentificationXtandemFile& othe
 {
 
 }
+
+pappso::SpectrumSp IdentificationXtandemFile::getSpectrumSp(unsigned int scan_number) const {
+    pappso::SpectrumSp spectrum_sp;
+    return spectrum_sp;
+}

src/core/identification_sources/identificationxtandemfile.h

@@ -34,6 +34,8 @@ public:
     ~IdentificationXtandemFile();
     bool operator==(const IdentificationXtandemFile& other) const;
 
+    virtual pappso::SpectrumSp getSpectrumSp(unsigned int scan_number) const;
+    
 private:
     const QFileInfo _xtandem_file;
 };

src/gui/peptide_detail_view/peptidewindow.cpp

@@ -69,6 +69,8 @@ void PeptideWindow::updateDisplay() {
         ui->z_label->setText(QString("%1").arg(_p_peptide_match->getCharge()));
         ui->scan_label->setText(QString("%1").arg(_p_peptide_match->getScan()));
         ui->modification_label->setText(_p_peptide_match->getPeptideXtpSp().get()->getModifString());
+        
+        
     }
     catch (pappso::PappsoException exception_pappso) {
         QMessageBox::warning(this,
@@ -83,5 +85,7 @@ void PeptideWindow::updateDisplay() {
 
 void PeptideWindow::setPeptideMatch(PeptideMatch * p_peptide_match) {
     _p_peptide_match = p_peptide_match;
+    
+    SpectrumSp spectrum = _p_peptide_match->getIdentificationDataSource()->getSpectrumSp(_p_peptide_match->getScan());
     updateDisplay();
 }