better ods2csv API

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@373 b8ef2a07-7df7-436f-90b9-41648038564b

xtandempipeline/src/fr/inra/pappso/xtandempipeline/output/CsvRedundantPeptideOutput.java

@@ -27,6 +27,7 @@ import java.io.OutputStream;
 
 import org.apache.log4j.Logger;
 
+import fr.inra.pappso.csv2ods.NumericFormat;
 import fr.inra.pappso.csv2ods.Ods2Csv;
 import fr.inra.pappso.xtandempipeline.MsException.MSMSException;
 
@@ -38,8 +39,11 @@ public class CsvRedundantPeptideOutput extends OdsRedundantPeptideOutput {
 	public CsvRedundantPeptideOutput(OutputStream outputStream)
 			throws MSMSException {
 		ods2csv = new Ods2Csv();
+		ods2csv.setSinkOutputStream(outputStream);
+		ods2csv.setNumericFormat(NumericFormat.en);
+		ods2csv.setSeparator('\t');
 		try {
-			odsTable = ods2csv.getOdsDocPipedOutput(outputStream);
+			odsTable = ods2csv.getOdsDocPipedOutput();
 		} catch (Exception e) {
 			String message = "error getting OdsDocPipedOutput "
 					+ e.getMessage();