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Commit 514a4809 authored by Olivier Langella's avatar Olivier Langella
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new column added in ods output to know the theoretical number of tryptic peptides per prot

parent 484dd156
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......@@ -117,6 +117,7 @@ public class OdsProteinOutput {
odsTable.writeCell("Specific");
odsTable.writeCell("Uniques");
odsTable.writeCell("Specific uniques");
odsTable.writeCell("Theoretical number of tryptic peptides");
odsTable.writeCell("PAI");
odsTable.writeCell("emPAI");
odsTable.writeCell("Sub-group proteins");
......@@ -210,11 +211,11 @@ public class OdsProteinOutput {
odsTable.writeCell("");
}
odsTable.writeCell(prot.getNumberOfTrypticPeptidesForPAI());
// odsTable.writeCell("PAI");
//odsTable.writeCell(new Double((float) hashProt
// .getTotalHashSampleScan() / prot.get_PAI_count()));
odsTable.writeCell(hashProt.getPAI());
odsTable.writeCell(prot.getNumberOfTrypticPeptidesForPAI());
//odsTable.writeCell(match.getPAI());//this is the same
/*
* ancien PAI odsTable.writeCell(new Double((float)
......
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