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Commit 484dd156 authored by Olivier Langella's avatar Olivier Langella
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emPAI computing error fixed : all components are treated as double

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src/fr/inra/pappso/xtandempipeline/class_msms/Match.java
+ 2
− 2
View file @ 484dd156
...@@ -181,14 +181,14 @@ public class Match implements Comparable<Match>, GrpProtMatch { ...@@ -181,14 +181,14 @@ public class Match implements Comparable<Match>, GrpProtMatch {
public double getEmPAI() { public double getEmPAI() {
// compute emPAI, Ishihama 2006 // compute emPAI, Ishihama 2006
double value = Math.pow(10.0, getPAI()) - 1; double value = Math.pow(10.0, getPAI()) - (double) 1.0;
return value; return value;
} }
public double getEmPAIbyMsRun(MsRun samp) throws MSMSException { public double getEmPAIbyMsRun(MsRun samp) throws MSMSException {
// compute emPAI, Ishihama 2006 // compute emPAI, Ishihama 2006
double value = Math.pow(10.0, getPAIbyMsRun(samp)) - 1; double value = Math.pow(10.0, getPAIbyMsRun(samp)) - (double) 1.0;
return value; return value;
} }
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src/fr/inra/pappso/xtandempipeline/grouping/HashSampleScanSetProt.java
+ 2
− 2
View file @ 484dd156
...@@ -181,14 +181,14 @@ public class HashSampleScanSetProt extends HashSampleScanSet { ...@@ -181,14 +181,14 @@ public class HashSampleScanSetProt extends HashSampleScanSet {
public double getEmPAI() { public double getEmPAI() {
// compute emPAI, Ishihama 2006 // compute emPAI, Ishihama 2006
double value = Math.pow(10.0, getPAI()) - 1; double value = Math.pow(10.0, getPAI()) - (double) 1.0;
return value; return value;
} }
public double getEmPAIbyMsRun(MsRun samp) throws MSMSException { public double getEmPAIbyMsRun(MsRun samp) throws MSMSException {
// compute emPAI, Ishihama 2006 // compute emPAI, Ishihama 2006
double value = Math.pow(10.0, getPAIbyMsRun(samp)) - 1; double value = Math.pow(10.0, getPAIbyMsRun(samp)) - (double) 1.0;
return value; return value;
} }
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