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A compter du 1er avril, attention à vos pipelines :
Nouvelles limitations de Docker Hub
Show more breadcrumbs
PAPPSO
i2MassChroQ
Commits
370a54be
Commit
370a54be
authored
7 years ago
by
Olivier Langella
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Plain Diff
FDR computation OK
parent
4a50ada7
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Changes
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2 changed files
src/gui/project_view/projectwindow.cpp
+14
-5
14 additions, 5 deletions
src/gui/project_view/projectwindow.cpp
src/gui/project_view/projectwindow.h
+1
-1
1 addition, 1 deletion
src/gui/project_view/projectwindow.h
with
15 additions
and
6 deletions
src/gui/project_view/projectwindow.cpp
+
14
−
5
View file @
370a54be
...
...
@@ -138,14 +138,23 @@ void ProjectWindow::refreshGroup(IdentificationGroup * p_ident_group) {
qDebug
()
<<
"ProjectWindow::refreshGroup end"
;
}
void
ProjectWindow
::
computeFdr
()
{
void
ProjectWindow
::
computeFdr
(
ValidationState
state
)
{
pappso
::
pappso_double
total_prot
=
0
;
pappso
::
pappso_double
false_prot
=
0
;
for
(
IdentificationGroup
*
identification_group
:
_project_sp
.
get
()
->
getIdentificationGroupList
())
{
total_prot
+=
identification_group
->
countProtein
(
ValidationState
::
grouped
);
false_prot
+=
identification_group
->
countDecoyProtein
(
ValidationState
::
grouped
);
total_prot
+=
identification_group
->
countProtein
(
state
);
false_prot
+=
identification_group
->
countDecoyProtein
(
state
);
}
ui
->
protein_fdr_label
->
setText
(
QString
(
"%1 %"
).
arg
(
false_prot
/
total_prot
));
pappso
::
pappso_double
total_peptide
=
0
;
pappso
::
pappso_double
false_peptide
=
0
;
for
(
IdentificationGroup
*
identification_group
:
_project_sp
.
get
()
->
getIdentificationGroupList
())
{
//total_peptide += identification_group->countPeptideMatch(state);
//false_peptide += identification_group->countDecoyPeptideMatch(state);
}
ui
->
peptide_fdr_label
->
setText
(
QString
(
"%1 %"
).
arg
(
false_peptide
/
total_peptide
));
}
void
ProjectWindow
::
doFdrChanged
()
{
...
...
@@ -158,7 +167,7 @@ void ProjectWindow::doFdrChanged() {
doIdentificationGroupEdited
(
identification_group
);
}
computeFdr
();
computeFdr
(
ValidationState
::
grouped
);
qDebug
()
<<
"ProjectWindow::doFdrChanged end "
;
}
void
ProjectWindow
::
doAutomaticFilterParametersChanged
(
AutomaticFilterParameters
parameters
)
{
...
...
@@ -336,6 +345,6 @@ void ProjectWindow::setProjectSp(ProjectSp project_sp) {
//_protein_list_window->show();
ui
->
decoy_protein_regexp_line_edit
->
setText
(
_project_sp
.
get
()
->
getProteinStore
().
getRegexpDecoy
().
pattern
());
computeFdr
();
computeFdr
(
ValidationState
::
grouped
);
this
->
setEnabled
(
true
);
}
This diff is collapsed.
Click to expand it.
src/gui/project_view/projectwindow.h
+
1
−
1
View file @
370a54be
...
...
@@ -68,7 +68,7 @@ protected :
void
doViewPeptideDetail
(
PeptideMatch
*
peptide_match
);
void
doViewProteinDetail
(
ProteinMatch
*
protein_match
);
void
doIdentificationGroupEdited
(
IdentificationGroup
*
p_identification_group
);
void
computeFdr
();
void
computeFdr
(
ValidationState
state
);
private
:
void
connectNewProteinListWindow
();
...
...
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