typst doc

doc/typst/chapters/a3a6_figure_psm_score.typ

@@ -2,17 +2,19 @@
 
 #figure([
 #image("../assets/xtpcpp-peptide-mass-spectrum-match-process.svg", width: 90%)
-#rect(radius: 1em, stroke: 0.5pt, fill: rgb("#e5e5e4"))[
-X!Tandem HyperScore: #box[
+#let block = block.with(inset: 0pt)
+#block[#rect(radius: 1em, stroke: 0.5pt, fill: rgb("#e5e5e4"))[
+X!Tandem HyperScore: #box(baseline: 40%,)[
 $
 (sum_(i=1)^n I_i P_i) N_b !  N_y !
 $]
-
-/ $n$: number of peak matches between the experimental and theoretical spectra
-/ $I_i$: intensity of the considered experimental peak
-/ $P_i$: ponderation of the considered experimental peak
-/ $N_b !$:factorial of the number of matched peaks of the b ion series
-/ $N_y !$: factorial of the number of matched peaks of the y ion series]
+#set align(left)
+/ #box(width: 1.6em)[$n$]: number of peak matches between the experimental and theoretical spectra
+/ #box(width: 1.6em)[$I_i$]: intensity of the considered experimental peak
+/ #box(width: 1.6em)[$P_i$]: ponderation of the considered experimental peak
+/ #box(width: 1.6em)[$N_b !$]:factorial of the number of matched peaks of the b ion series
+/ #box(width: 1.6em)[$N_y !$]: factorial of the number of matched peaks of the y ion series]]
+#block[#text(size: 1.8em)[H-S yyy >> H-S xxx >> H-s zzz]]
 
 
 The process starts with a full scan mass spectrum from which the mass