first debian package

CMakeLists.txt

@@ -33,11 +33,15 @@ ENDIF( CMAKE_BUILD_TYPE MATCHES "RelWithDebInfo" )
 SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11")
 
 
+#depending on libpappsomspp version :
+SET(LIBPAPPSOMSPP_VERSION "0.2.33-1~stretch")
+configure_file (${CMAKE_SOURCE_DIR}/debian/control.cmake ${CMAKE_SOURCE_DIR}/debian/control  @ONLY)
+
 
 SET(SOFTWARE_NAME "XTPcpp")
 
 SET(XTPCPP_VERSION_MAJOR "0")
-SET(XTPCPP_VERSION_MINOR "2")
+SET(XTPCPP_VERSION_MINOR "1")
 SET(XTPCPP_VERSION_PATCH "0")
 SET(XTPCPP_VERSION "${XTPCPP_VERSION_MAJOR}.${XTPCPP_VERSION_MINOR}.${XTPCPP_VERSION_PATCH}")
 
@@ -67,11 +71,11 @@ ENDIF (DOXYGEN_FOUND)
 # Packager
 SET(CPACK_PACKAGE_NAME "xtpcpp")
 SET(CPACK_PACKAGE_VENDOR "PAPPSO Development Team")
-SET(CPACK_PACKAGE_VERSION "${PAPPSOMSTOOLS_VERSION}")
-SET(CPACK_PACKAGE_VERSION_MAJOR "${PAPPSOMSTOOLS_VERSION_MAJOR}")
-SET(CPACK_PACKAGE_VERSION_MINOR "${PAPPSOMSTOOLS_VERSION_MINOR}")
-SET(CPACK_PACKAGE_VERSION_PATCH "${PAPPSOMSTOOLS_VERSION_PATCH}")
-SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "various mass spectrometry and proteomics tools")
+SET(CPACK_PACKAGE_VERSION "${XTPCPP_VERSION}")
+SET(CPACK_PACKAGE_VERSION_MAJOR "${XTPCPP_VERSION_MAJOR}")
+SET(CPACK_PACKAGE_VERSION_MINOR "${XTPCPP_VERSION_MINOR}")
+SET(CPACK_PACKAGE_VERSION_PATCH "${XTPCPP_VERSION_PATCH}")
+SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "protein inference tool")
 SET(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_SOURCE_DIR}/COPYING")
 SET(CPACK_RESOURCE_FILE_AUTHORS "${CMAKE_SOURCE_DIR}/AUTHORS")
 SET(CPACK_RESOURCE_FILE_INSTALL "${CMAKE_SOURCE_DIR}/INSTALL")
@@ -142,14 +146,14 @@ IF (UNIX)
 
 
 	add_custom_target(targz
-		cpack -G TGZ --config CPackSourceConfig.cmake && tar xvfz ${CPACK_PACKAGE_NAME}-${PAPPSOMSTOOLS_VERSION}.tar.gz
+		cpack -G TGZ --config CPackSourceConfig.cmake && tar xvfz ${CPACK_PACKAGE_NAME}-${XTPCPP_VERSION}.tar.gz
 		WORKING_DIRECTORY ${CMAKE_BINARY_DIR}
 		COMMENT "Creating .tar.gz" VERBATIM
 	)
 
 
 	add_custom_target(deb
-		cd ${CPACK_PACKAGE_NAME}-${PAPPSOMSTOOLS_VERSION} && dpkg-buildpackage
+		cd ${CPACK_PACKAGE_NAME}-${XTPCPP_VERSION} && dpkg-buildpackage
 		DEPENDS targz
 		WORKING_DIRECTORY ${CMAKE_BINARY_DIR}
 		COMMENT "Creating Debian package" VERBATIM
@@ -182,4 +186,7 @@ SET(UPDATE_OPTIONS "")
 #  ADD_SUBDIRECTORY(test)
 #ENDIF(BUILD_TESTING)
 
-INSTALL(PROGRAMS ${CMAKE_BINARY_DIR}/src/xtpcpp DESTINATION bin)
\ No newline at end of file
+configure_file (${CMAKE_SOURCE_DIR}/templates/share/applications/xtpcpp.desktop.cmake ${CMAKE_BINARY_DIR}/templates/share/applications/xtpcpp.desktop)
+INSTALL(PROGRAMS ${CMAKE_BINARY_DIR}/src/xtpcpp DESTINATION bin)
+INSTALL(FILES ${CMAKE_BINARY_DIR}/templates/share/applications/xtpcpp.desktop DESTINATION share/applications)
+INSTALL(FILES ${CMAKE_SOURCE_DIR}/src/resources/xtandempipeline_icon.svg DESTINATION share/xtpcpp)

debian/changelog

+xtpcpp (0.1.0-1) stretch; urgency=medium
+
+  * first package
+
+ -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 18 Apr 2017 20:55:14 +0200
+

debian/control

-Source: xtpcpp
-Maintainer: Olivier Langella <Olivier.Langella@moulon.inra.fr>
-Homepage: http://pappso.inra.fr/bioinfo
-Section: libs
-Priority: optional
-Build-Depends: debhelper (>= 9), cmake (>= 2.6), libqt4-dev (>= 4.8), libpappsomspp-dev (= 0.2.32-3), libpwiz-dev, libodsstream-dev
-Standards-Version: 3.9.4
-
-Package: xtpcpp
-Architecture: any
-Multi-Arch: same
-Depends: ${shlibs:Depends},
-         ${misc:Depends}, libpappsomspp-qt4 (= 0.2.32-3), libpwiz3,
-         libodsstream-qt4, libqt4-gui, libqt4-svg, libqt4-xml
-Pre-Depends: ${misc:Pre-Depends}
-Description: C++ version of X!TandemPipeline

debian/control.cmake

 Source: xtpcpp
-Maintainer: Olivier Langella <Olivier.Langella@moulon.inra.fr>
+Maintainer: Olivier Langella <olivier.langella@u-psud.fr>
 Homepage: http://pappso.inra.fr/bioinfo
 Section: libs
 Priority: optional

debian/xtpcpp.install

 usr/bin/xtpcpp
 usr/share/applications/xtpcpp.desktop
+usr/share/xtpcpp/xtandempipeline_icon.svg

src/CMakeLists.txt

@@ -27,11 +27,11 @@ SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${Qt5Xml_EXECUTABLE_COMPILE_FLAGS} ${Qt5
 
 
 #sudo apt-get install libpappsomspp-dev
-#FIND_PACKAGE( Pappsomspp REQUIRED )
- SET (PAPPSOMSPP_DIR  "/home/olivier/eclipse/git/pappsomspp")
+FIND_PACKAGE( Pappsomspp REQUIRED )
+# SET (PAPPSOMSPP_DIR  "/home/olivier/eclipse/git/pappsomspp")
 # SET (PAPPSOMSPP_DIR  "/home/langella/developpement/git/pappsomspp")
- SET (PAPPSOMSPP_INCLUDE_DIR "${PAPPSOMSPP_DIR}/src")
- SET (PAPPSOMSPP_QT4_LIBRARY "${PAPPSOMSPP_DIR}/cbuild/src/libpappsomspp-qt4.so")
+# SET (PAPPSOMSPP_INCLUDE_DIR "${PAPPSOMSPP_DIR}/src")
+# SET (PAPPSOMSPP_QT4_LIBRARY "${PAPPSOMSPP_DIR}/cbuild/src/libpappsomspp-qt4.so")
 
 
 set(CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake_modules)

templates/share/applications/xtpcpp.desktop.cmake

+[Desktop Entry]
+Name=X!TandemPipeline C++
+Categories=Education;Science;Math;
+Comment=Protein inference tool
+Exec=${CMAKE_INSTALL_PREFIX}/bin/xtpcpp
+Icon=${CMAKE_INSTALL_PREFIX}/share/xtpcpp/xtandempipeline_icon.svg
+Terminal=false
+Type=Application
+StartupNotify=true