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Commit f7201d52 authored by Alexis Mergez's avatar Alexis Mergez
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Update README.md

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......@@ -26,6 +26,18 @@ PanGeTools - Pangenomic General tools - Version 1.8c
```
Apptainer container containing useful tools for pangenomics analysis. Versions of tools is reported in the definition file, in the help section.
# Install
To download the container :
```
apptainer pull PanGeTools.sif oras://registry.forgemia.inra.fr/alexis.mergez/pangetools/pangetools:latest
```
To execute the container :
```
./PanGeTools.sif <command>
# or
apptainer run --app <cmd name> PanGeTools.sif <cmd args>
```
Add the following function to your bashrc to have easier commands :
```
# Folder containing apptainer images (.sif)
......
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