updated README.md

README.md

@@ -63,25 +63,19 @@ This step uses the following files: `dsmz-match.plan`, `bacdive2alvisnlp.xslt` a
 
 The DSMZ match results are written in the `dsmz-match` directory in the output directory.
 
-#### `report.txt`
+#### `dispatch-report.txt`
 
-A tabular file where each line represents a match.
+A tabular file where each line represents a DSMZ catalog entry.
 
-* `BACDIVE ID`: BacDive entry identifier, **this is different from the DSM catalogue number**.
-* `FIELD`: strain form, either `catalog-number`, `species`, or `species-and-number`.
-* `NAME`: strain form that matches.
-* `NCBI TAXID`: matched taxon identifier in the NCBI taxonomy.
-* ̀ǸCBI CANONICAL`: canonical name of the matched taxon in the NCBI taxonomy.
-* `NCBI RANK`: taxonomic rank of the matched taxon in the NCBI taxonomy.
+* `ENTRY`: name of the catalog entry file.
+* `DISPATCH`: dipatch decision
+  * `append`: new strain appended to NCBI species or NCBI subspecies
+  * `append-species`: new strain and lineage appended to NCBI superspecific taxon
+  * `equivalent`: equivalence with NCBI strain
+  * `type material`: equivelence with NCBI species or subspecies given as type strain
+  * `no-number`: strain has no designation or number
+  * `fail`: no match at any taxonomic level
 
-The three last columns are empty if there is no match.
+#### `dsmz-nodes.txt` 
 
-#### The decision tree
-
-1. Try to match 
-
-
-
-#### `equivalent-strains.txt`
-
-This file shows equivalence between catalog entries and the NCBI 
\ No newline at end of file
+Files in the format of NCBI Taxonomy `nodes.dmp` and `names.dmp` that contains all additions.