Merge requests · metexplore / met4j

fix docker

!34 · created Oct 07, 2024 by Ludovic Cottret develop
- Merged
updated Oct 07, 2024
ORA

!31 · created Jul 20, 2023 by Clement Frainay develop
met4j-toolbox
- Merged
- Approved
updated Jul 25, 2023
Implementation of topological pathway analysis

!27 · created Jan 30, 2023 by Clement Frainay develop
met4j-graph met4j-toolbox
- Merged
- 15
- Approved
updated Jul 25, 2023
add ReactionDistanceMatrix app

!29 · created May 04, 2023 by Louison Fresnais develop
- Merged
- 4
updated Jul 10, 2023
Flat SBML (no compartments)

!30 · created Jun 01, 2023 by Clement Frainay develop
met4j-core met4j-toolbox
- Merged
- 33
updated Jun 26, 2023
Pathway network creation

!28 · created Feb 09, 2023 by Clement Frainay develop
met4j-graph met4j-toolbox
- Merged
- 2
- Approved
updated Feb 14, 2023
Feature/bipartite distance matrix app2

!25 · created Jan 05, 2023 by Louison Fresnais develop
- Merged
- 3
updated Jan 12, 2023
Fix handling of weighted metabolic graph as undirected

!26 · created Jan 05, 2023 by Clement Frainay develop
bug met4j-graph met4j-toolbox
- Merged
- 1
- Approved
updated Jan 06, 2023
Feature/get distance manyto many

!18 · created Jul 28, 2022 by Louison Fresnais develop
- Merged
- 5
- Approved
updated Dec 07, 2022
Expand SBML Mapping

!24 · created Nov 17, 2022 by Clement Frainay develop
- Merged
- 6
updated Dec 02, 2022
reaction balance

!23 · created Nov 17, 2022 by Ludovic Cottret
met4j-core met4j-toolbox
- Merged
- 1
updated Dec 02, 2022
Feature/set ids from file

!22 · created Nov 14, 2022 by Ludovic Cottret develop
met4j-core met4j-toolbox
updated Nov 15, 2022
Feature/get seeds

!20 · created Sep 22, 2022 by Clement Frainay develop
met4j-toolbox
- Merged
- 3
- Approved
updated Oct 21, 2022
create apps to export degree and chemical similarity weights for compound graphs

!19 · created Sep 16, 2022 by Clement Frainay develop
- Merged
- 1
updated Sep 22, 2022
Features/reaction side cpds

!16 · created Jul 19, 2022 by Louison Fresnais develop
- Merged
- 11
- Approved
updated Sep 16, 2022
Feature/app sbml extract 3 of 4 checklist items completed

!17 · created Jul 28, 2022 by Clement Frainay develop
met4j-toolbox
- Merged
- 1
updated Jul 29, 2022
Draft: parallelize several GetShortestPath loops

!15 · created May 11, 2022 by Louison Fresnais develop
met4j-graph
- Merged
- 6
- Approved
updated Jun 01, 2022
[toolbox] Galaxy wrappers and json description

!11 · created Apr 01, 2022 by Ludovic Cottret develop
met4j-toolbox
- Merged
- Approved
updated May 23, 2022
Docker

!13 · created Apr 25, 2022 by Ludovic Cottret develop
cicd
- Merged
updated Apr 25, 2022
Singularity

!12 · created Apr 22, 2022 by Ludovic Cottret develop
cicd
- Merged
updated Apr 22, 2022