Closed
Milestone
Nov 29, 2022–Dec 31, 2023
Meteor 3.3
Conversion to python, functionnal analysis, simplification. This version of Meteor is intended for publication and researchers.
Unstarted Issues (open and unassigned)
0
Ongoing Issues (open and assigned)
0
Completed Issues (closed)
21
- Add functional module computation based on MGS
- Debug the output ini file for functional computation
- Add functional computation by mgs
- Add meteor merge
- Update details according to 13rd July meeting
- Fix column names when loading matrices
- Remove tmp dir after meteor test
- Write bam temporary file in the -tmp dir
- Compare meteor counts
- create short catalogue and make deposit
- Add KO and mustard index in the gitlab
- Estimate best performing approach between meteor and pysam
- Cover every python script with test
- Create a deposit for every catalogue in the dataverse inrae
- add mypy in routine gitlab-ci
- Include meteor-profiler in the main program
- Make meteor-counter running
- Handle path with pathlib
- pytest ?
- Clean C++ code and unit test
- Translate ruby code to python3
Loading
Loading
Loading