debug Mapping_using_the_API

Mapping_using_the_API.py

@@ -436,7 +436,7 @@ def m_ora_cpdb(accnumbers, acctype, cpdbidsbg=None,
             if len(l_map) == len(accnumbers):
                 break
         for id_m in l_map:
-            id_t = id_m.replace("k", "kegg").replace("']", "")
+            id_t = id_m.replace("k", "kegg").replace("c","chebi").replace("']", "")
             id_cln = tab_cor[1].index(id_t)
             l_map_cor.append(tab_cor[0][id_cln])
         return l_map_cor
@@ -501,6 +501,8 @@ def m_ora_cpdb(accnumbers, acctype, cpdbidsbg=None,
         for o_s_i, o_s in enumerate(ov_splited):
             if o_s_i == 0:
                 o_s_i_temp = o_s.replace("C", "kegg:C").replace("']", "")
+                if "C" not in o_s_i_temp:
+                    o_s_i_temp = "chebi:" + o_s_i_temp
                 i_u = tab_cor[0][tab_cor[1].index(o_s_i_temp)]
                 clean_id.append(i_u)
             else:
@@ -646,11 +648,11 @@ def opti_multimapping(file, outfolder, mapping="YES"):
     l_opt_ramp_tri[0] = "RAMP"
     recap.append(l_opt_ramp_tri)
     recap = pd.DataFrame(data=recap).transpose()
-    n_out_f = outfolder+"recap_mapping_opti.xlsx"
+    n_out_f = outfolder+"recap_mapping_opti_oeil.xlsx"
     excel_file_writer(recap, n_out_f, sheetname="Resultats")
     return "all is ok"
 
 
 if __name__ == "__main__":
-    F_ENTER = FOLDER+"fichier_entree_test_multi_mapping.xlsx"
+    F_ENTER = FOLDER+"Donnees_oeil_mis_en_forme_opti_mapping.xlsx"
     opti_multimapping(F_ENTER, FOLDER)