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PCA/PCA_v012025.sh

+#!/bin/bash
+#SBATCH -p dgimi-eha
+
+
+cd /lustre/durandk/HELICOVERPA/MERGING/
+
+
+/nfs/work/faw_adaptation/programs/plink1.9/plink  --double-id  --vcf  /storage/simple/projects/faw_adaptation/Merged_vcf/Helicoverpa/31CHROM_VCF/DATA_138.Helicoverpa_5122024.filtered09_renamedV2.recode.vcf.gz   --allow-extra-chr --chr-set 31  --pca --out /lustre/durandk/HELICOVERPA/PCA/PCA_138.Helicoverpa_5122024.filtered09_renamedV2
+ 
+