Commits · 28a6310c31aed6f4837fcf2ce9b33c7bd27f64a4 · IRHS-Bioinfo / BiSePS

Apr 14, 2022
- trying fix of symlinks on windows · 28a6310c
  Skander Hatira authored 2 years ago
  
  28a6310c
Apr 07, 2022
- another one - DJ K · 87e53d0f
  Skander Hatira authored 2 years ago
  
  87e53d0f
- importing config in snakemake helper · 381cd20c
  Skander Hatira authored 2 years ago
  
  381cd20c
- use config file to get conda path when launching biseps on unix from dock · 20ae9b7d
  Skander Hatira authored 2 years ago
  
  20ae9b7d
- merging · c2de7a1e
  Hatira Skander authored 2 years ago
  
  c2de7a1e
- fixing paths · ed069948
  Skander Hatira authored 2 years ago
  
  ed069948
- adapting alignment and comparisons · 4280b55a
  Hatira Skander authored 2 years ago
  
  4280b55a
Apr 05, 2022
- fix launching from dock linux · c36b6458
  Skander Hatira authored 2 years ago
  
  c36b6458
- Merge branch 'rebase' · e2b2143d
  Skander Hatira authored 2 years ago
  
  e2b2143d
- fixed windows launch, started adapting paths · 4620257e
  Skander Hatira authored 2 years ago
  
  4620257e
Apr 01, 2022
- testing github mirror · 8d898d60
  Skander Hatira authored 2 years ago
  
  8d898d60
- testing github mirror · 34c21d79
  Skander Hatira authored 2 years ago
  
  34c21d79
- fixed, for real · 953777ae
  Skander Hatira authored 2 years ago
  
  953777ae
- fixing node image · 13ef9561
  Skander Hatira authored 2 years ago
  
  13ef9561
- fixing linux build · a6a2726b
  Skander Hatira authored 2 years ago
  
  a6a2726b
- switching to openstack runner · 38b7dc38
  Skander Hatira authored 2 years ago
  
  38b7dc38
Mar 31, 2022
- removing Mac build · 726029f5
  Skander Hatira authored 2 years ago
  
  726029f5
- added notifications button for slurm mails · eb85dbb6
  Skander Hatira authored 2 years ago
  
  eb85dbb6
- switching to using coverage files as they're much smaller · b6b2a21c
  Skander Hatira authored 2 years ago
  
  b6b2a21c
Mar 23, 2022
- adapting visualization and adding error handling · 8bde755b
  Skander Hatira authored 3 years ago
  
  8bde755b
- functional determinate progress bar · 25d641fc
  Skander Hatira authored 3 years ago
  
  25d641fc
Mar 17, 2022
- code cleanup plus path fix · a1296a66
  Skander Hatira authored 3 years ago
  
  a1296a66
- great improvement on configuration handling and conda paths · 1812459f
  Skander Hatira authored 3 years ago
  
  1812459f
Mar 15, 2022
- migrated database and conda envs to a homedir based hidden folder for biseps,... · a1fd334d
  Skander Hatira authored 3 years ago
  
  migrated database and conda envs to a homedir based hidden folder for biseps, makes everything much faster
  a1fd334d
Mar 01, 2022
- trying to fix permissions for resources files · 3fb3ae85
  Skander Hatira authored 3 years ago
  
  3fb3ae85
- fixed server and database error handling in async call · bb13ec24
  Skander Hatira authored 3 years ago
  
  bb13ec24
Feb 18, 2022
- updating biseps pipeline · 827d50ce
  Skander Hatira authored 3 years ago
  
  827d50ce
- adding git as a dependency of bisepsSnakemake environment .yml · 6a974683
  Skander Hatira authored 3 years ago
  
  6a974683
Feb 17, 2022
- code cleanup , ssh to https · 7ed3c879
  Skander Hatira authored 3 years ago
  
  7ed3c879
Dec 23, 2021
- fixed annot handling, and figured out the need to specify remote before experimental design · 8edff5e3
  Skander Hatira authored 3 years ago
  
  8edff5e3
Dec 16, 2021
- trying another fix · 3511ae6d
  Skander Hatira authored 3 years ago
  
  3511ae6d
- problem with invalid signature was probably due to latest node version,... · 15692be8
  Skander Hatira authored 3 years ago
  
  problem with invalid signature was probably due to latest node version, switched to lts tag in gitlab ci
  15692be8
- fixing assetsgeneration · deb93e88
  Skander Hatira authored 3 years ago
  
  deb93e88
- opening folder fix · 5780331b
  Skander Hatira authored 3 years ago
  
  5780331b
Dec 03, 2021
- visualization functional · 0842300a
  Skander Hatira authored 3 years ago
  
  0842300a
- corrected database accession for comparisons context and validated remote exec · fdddd182
  Skander Hatira authored 3 years ago
  
  fdddd182
- migration to methylkit on the GUI side functional, in local mode · 9b2ec20d
  Skander Hatira authored 3 years ago
  
  9b2ec20d
Nov 29, 2021
- seperated CX report and MultiQC file download · 53021435
  Skander Hatira authored 3 years ago
  
  53021435
Oct 11, 2021
- binsize stepper reduce step · fbbd88a5
  Skander Hatira authored 3 years ago
  
  fbbd88a5
Oct 01, 2021
- fastGet fix remote paths · 93979dc4
  Skander Hatira authored 3 years ago
  
  93979dc4